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kssd: enable aarch64-linux support & tests

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natsukium 2023-11-03 18:00:30 +09:00
parent 847c506eae
commit 10c3a40621
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1 changed files with 12 additions and 1 deletions
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13
pkgs/applications/science/biology/kssd/default.nix
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@ -3,6 +3,8 @@
, fetchFromGitHub
, fetchpatch
, zlib
, kssd
, runCommand
}:
stdenv.mkDerivation (finalAttrs: {
@ -35,12 +37,21 @@ stdenv.mkDerivation (finalAttrs: {
runHook postInstall
'';
passthru.tests = {
simple = runCommand "${finalAttrs.pname}-test" { } ''
mkdir $out
${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -r ${kssd.src}/test_fna/seqs1 -o $out/reference
${lib.getExe kssd} dist -L ${kssd.src}/shuf_file/L3K10.shuf -o $out/query ${kssd.src}/test_fna/seqs2
${lib.getExe kssd} dist -r $out/reference -o $out/distout $out/query
'';
};
meta = with lib; {
description = "K-mer substring space decomposition";
license = licenses.asl20;
homepage = "https://github.com/yhg926/public_kssd";
maintainers = with maintainers; [ unode ];
platforms = [ "x86_64-linux" ];
platforms = platforms.linux;
mainProgram = "kssd";
};
})