seqtk: init at 1.3
Co-authored-by: Anderson Torres <torres.anderson.85@protonmail.com>
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pkgs/applications/science/biology/seqtk/default.nix
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39
pkgs/applications/science/biology/seqtk/default.nix
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@ -0,0 +1,39 @@
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{ lib
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, stdenv
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, fetchFromGitHub
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, zlib
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, libdeflate
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, isa-l
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}:
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stdenv.mkDerivation rec {
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pname = "seqtk";
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version = "1.3";
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src = fetchFromGitHub {
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owner = "lh3";
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repo = "seqtk";
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rev = "v${version}";
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hash = "sha256-1Hw/lnoFQumuEJg1n2C6vnWkBa+VLiEiDrosghSm360=";
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};
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buildInputs = [ zlib libdeflate isa-l ];
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makeFlags = [ "CC=cc" ];
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installPhase = ''
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runHook preInstall
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install -Dm755 -t $out/bin seqtk
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runHook postInstall
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'';
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meta = with lib; {
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description = "Toolkit for processing sequences in FASTA/Q formats";
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license = licenses.mit;
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homepage = "https://github.com/lh3/seqtk";
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platforms = platforms.all;
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maintainers = with maintainers; [ bwlang ];
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};
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}
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@ -34706,6 +34706,8 @@ with pkgs;
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stdenv = gccStdenv;
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};
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seqtk = callPackage ../applications/science/biology/seqtk { };
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snpeff = callPackage ../applications/science/biology/snpeff { };
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somafm-cli = callPackage ../tools/misc/somafm-cli { };
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