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dssp: 4.0.5 -> 4.2.2.1

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https://github.com/PDB-REDO/dssp/compare/v4.0.5...v4.2.2.1
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natsukium 2023-03-19 12:46:22 +09:00
parent 28bc96eeca
commit 62943901dd
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1 changed files with 15 additions and 4 deletions
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19
pkgs/applications/science/biology/dssp/default.nix
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@ -1,19 +1,30 @@
{ lib, stdenv, fetchFromGitHub, boost, cmake, libcifpp, zlib, }:
{ lib, stdenv, fetchFromGitHub, cmake, libcifpp, libmcfp, zlib }:
let
libcifpp' = libcifpp.overrideAttrs (oldAttrs: rec {
# dssp 4.2.2.1 requires specific version "5.0.8" of libcifpp
version = "5.0.8";
src = fetchFromGitHub {
inherit (oldAttrs.src) owner repo;
rev = "v${version}";
sha256 = "sha256-KJGcopGhCWSl+ElG3BPJjBf/kvYJowOHxto6Ci1IMco=";
};
});
in
stdenv.mkDerivation rec {
pname = "dssp";
version = "4.0.5";
version = "4.2.2.1";
src = fetchFromGitHub {
owner = "PDB-REDO";
repo = pname;
rev = "v${version}";
sha256 = "1x35rdcm4fch66pjbmy73lv0gdb6g9y3v023a66512a6nzsqjsir";
sha256 = "sha256-vmGvC5d8LTo+pcY9sxwj0d6JvH8Lyk+QSOZo5raBci4=";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ boost libcifpp zlib ];
buildInputs = [ libcifpp' libmcfp zlib ];
meta = with lib; {
description = "Calculate the most likely secondary structure assignment given the 3D structure of a protein";