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Added emboss

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svn path=/nixpkgs/trunk/; revision=11993
This commit is contained in:
Pjotr Prins 2008-06-05 17:14:33 +00:00
parent 5866a8b101
commit 62c9176206
1 changed files with 30 additions and 0 deletions
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pkgs/applications/science/biology/emboss/default.nix Normal file
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{stdenv, fetchurl, readline, perl, libX11, libpng, libXt, zlib}:
stdenv.mkDerivation {
name = "emboss-5.0.0-9";
src = fetchurl {
url = ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-5.0.0.tar.gz;
sha256 = "1bj0bxfj97cgnk3w3123cqn5sq5xsbvzs8bzvqkgy6d7hadz1rk4";
};
patch = fetchurl {
url = ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-9.gz;
sha256 = "1pfn5zdxrr71c3kwpdkzmmsqvdwkmynkvcr707vqh73h9cjhk3c1";
};
buildInputs = [readline perl libpng libX11 libXt zlib];
preConfigure = ''
gzip -d $patch | patch -p1
'';
meta = {
description = "EMBOSS is 'The European Molecular Biology Open Software Suite'";
longDescription = ''EMBOSS is a free Open Source software analysis package
specially developed for the needs of the molecular biology (e.g. EMBnet)
user community. The software automatically copes with data in a variety of
formats and even allows transparent retrieval of sequence data from the
web.'';
license = "GPL2";
homepage = http://emboss.sourceforge.net/;
};
}