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Merge pull request #181954 from bzizou/treemix

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Sandro 2022-09-05 15:57:48 +02:00 committed by GitHub
commit 73bf7a0ca0
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2 changed files with 29 additions and 0 deletions
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27
pkgs/applications/science/biology/treemix/default.nix Normal file
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@ -0,0 +1,27 @@
{ lib
, stdenv
, fetchurl
, zlib
, gsl
, boost
}:
stdenv.mkDerivation rec {
pname = "treemix";
version = "1.13";
src = fetchurl {
url = "https://bitbucket.org/nygcresearch/treemix/downloads/${pname}-${version}.tar.gz";
sha256 = "1nd3rzsdgk47r8b8k43mdfvaagln533sm08s1jr0dz8km8nlym7y";
};
buildInputs = [ zlib gsl boost ];
meta = with lib ; {
description = "Inference of patterns of population splitting and mixing from genome-wide allele frequency data";
homepage = "https://bitbucket.org/nygcresearch/treemix/wiki/Home";
license = licenses.gpl3Only;
maintainers = [ maintainers.bzizou ];
platforms = platforms.linux;
};
}

2
pkgs/top-level/all-packages.nix
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@ -34262,6 +34262,8 @@ with pkgs;
tebreak = callPackage ../applications/science/biology/tebreak { };
treemix = callPackage ../applications/science/biology/treemix { };
trimal = callPackage ../applications/science/biology/trimal { };
truvari = callPackage ../applications/science/biology/truvari { };