Merge staging-next into staging

nixos/modules/services/networking/consul.nix

@@ -80,13 +80,21 @@ in
             The name of the interface to pull the bind_addr from.
           '';
         };
+      };
 
+      forceAddrFamily = mkOption {
+        type = types.enum [ "any" "ipv4" "ipv6" ];
+        default = "any";
+        description = ''
+          Whether to bind ipv4/ipv6 or both kind of addresses.
+        '';
       };
 
       forceIpv4 = mkOption {
-        type = types.bool;
-        default = false;
+        type = types.nullOr types.bool;
+        default = null;
         description = ''
+          Deprecated: Use consul.forceAddrFamily instead.
           Whether we should force the interfaces to only pull ipv4 addresses.
         '';
       };
@@ -175,6 +183,13 @@ in
         systemPackages = [ cfg.package ];
       };
 
+      warnings = lib.flatten [
+        (lib.optional (cfg.forceIpv4 != null) ''
+          The option consul.forceIpv4 is deprecated, please use
+          consul.forceAddrFamily instead.
+        '')
+      ];
+
       systemd.services.consul = {
         wantedBy = [ "multi-user.target" ];
         after = [ "network.target" ] ++ systemdDevices;
@@ -196,15 +211,21 @@ in
         });
 
         path = with pkgs; [ iproute2 gnugrep gawk consul ];
-        preStart = ''
+        preStart = let
+          family = if cfg.forceAddrFamily == "ipv6" then
+            "-6"
+          else if cfg.forceAddrFamily == "ipv4" then
+            "-4"
+          else
+            "";
+        in ''
           mkdir -m 0700 -p ${dataDir}
           chown -R consul ${dataDir}
 
           # Determine interface addresses
           getAddrOnce () {
-            ip addr show dev "$1" \
-              | grep 'inet${optionalString (cfg.forceIpv4) " "}.*scope global' \
-              | awk -F '[ /\t]*' '{print $3}' | head -n 1
+            ip ${family} addr show dev "$1" scope global \
+              | awk -F '[ /\t]*' '/inet/ {print $3}' | head -n 1
           }
           getAddr () {
             ADDR="$(getAddrOnce $1)"
@@ -234,6 +255,11 @@ in
       };
     }
 
+    # deprecated
+    (mkIf (cfg.forceIpv4 != null && cfg.forceIpv4) {
+      services.consul.forceAddrFamily = "ipv4";
+    })
+
     (mkIf (cfg.alerts.enable) {
       systemd.services.consul-alerts = {
         wantedBy = [ "multi-user.target" ];

pkgs/applications/audio/ft2-clone/default.nix

@@ -13,13 +13,13 @@
 
 stdenv.mkDerivation rec {
   pname = "ft2-clone";
-  version = "1.52";
+  version = "1.54";
 
   src = fetchFromGitHub {
     owner = "8bitbubsy";
     repo = "ft2-clone";
     rev = "v${version}";
-    sha256 = "sha256-RyZ3PV7jaTN3DEYMT0BqKDHbb+7/IgiRaCra1xA0h1A=";
+    sha256 = "sha256-lNiQ0X2vvPGubb4Pde+eh0Z6ClCQgigIUM+PddaiVUg=";
   };
 
   # Adapt the linux-only CMakeLists to darwin (more reliable than make-macos.sh)

pkgs/applications/audio/pt2-clone/default.nix

@@ -8,13 +8,13 @@
 
 stdenv.mkDerivation rec {
   pname = "pt2-clone";
-  version = "1.43";
+  version = "1.46";
 
   src = fetchFromGitHub {
     owner = "8bitbubsy";
     repo = "pt2-clone";
     rev = "v${version}";
-    sha256 = "sha256-+sHGjgDqizv/9n0dDj8knsl+4MBfO3/pMkmD+MPsuNM=";
+    sha256 = "sha256-xRq37hjuMiGxsWRnZ/ryXYLvQpjbfQEjQkMjjuqL7r8=";
   };
 
   nativeBuildInputs = [ cmake ];

pkgs/applications/blockchains/alfis/default.nix

@@ -14,16 +14,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "alfis";
-  version = "0.6.11";
+  version = "0.7.0";
 
   src = fetchFromGitHub {
     owner = "Revertron";
     repo = "Alfis";
     rev = "v${version}";
-    sha256 = "sha256-vm/JBJh58UaSem18RpJuPUzM2GCy4RfCb6Hr1B7KWQA=";
+    sha256 = "sha256-lamobXaDY+v8NpoI+TuuBO5Cdol9+7VPhdmLEH6sZIo=";
   };
 
-  cargoSha256 = "sha256-8ijGO8up0qVQ/kVX5/DveKyovYLh7jm+d7vooS1waAA=";
+  cargoSha256 = "sha256-C5MCT4EG/lI4s2rVGSm9DgBu43FKpp3iTBbCf7N1jOA=";
 
   checkFlags = [
     # these want internet access, disable them

pkgs/applications/networking/cluster/terraform-providers/default.nix

@@ -32,6 +32,7 @@ let
         CGO_ENABLED = 0;
         ldflags = [ "-s" "-w" "-X main.version=${version}" "-X main.commit=${rev}" ];
         src = fetchFromGitHub {
+          name = "source-${rev}";
           inherit owner repo rev sha256;
         };
 

pkgs/applications/networking/instant-messengers/zulip/default.nix

@@ -5,12 +5,12 @@
 
 let
   pname = "zulip";
-  version = "5.9.1";
+  version = "5.9.2";
   name = "${pname}-${version}";
 
   src = fetchurl {
     url = "https://github.com/zulip/zulip-desktop/releases/download/v${version}/Zulip-${version}-x86_64.AppImage";
-    hash = "sha256-hUi4t7WdZG6GmNQfUcG4E9qGJDdPIMbglJzwR7tFNVQ=";
+    hash = "sha256-PJ7/KOtfjH1RHMzAKSr9Y/82Z0vL2wBy3GgI/0JrlpM=";
     name="${pname}-${version}.AppImage";
   };
 

pkgs/applications/science/math/giac/default.nix

@@ -1,6 +1,6 @@
 { stdenv, lib, fetchurl, fetchpatch, texlive, bison, flex, lapack, blas
-, gmp, mpfr, pari, ntl, gsl, mpfi, ecm, glpk, nauty
-, readline, gettext, libpng, libao, gfortran, perl
+, autoreconfHook, gmp, mpfr, pari, ntl, gsl, mpfi, ecm, glpk, nauty
+, buildPackages, readline, gettext, libpng, libao, gfortran, perl
 , enableGUI ? false, libGL, libGLU, xorg, fltk
 , enableMicroPy ? false, python3
 }:
@@ -9,11 +9,11 @@ assert (!blas.isILP64) && (!lapack.isILP64);
 
 stdenv.mkDerivation rec {
   pname = "giac${lib.optionalString enableGUI "-with-xcas"}";
-  version = "1.6.0-47"; # TODO try to remove preCheck phase on upgrade
+  version = "1.9.0-5"; # TODO try to remove preCheck phase on upgrade
 
   src = fetchurl {
     url = "https://www-fourier.ujf-grenoble.fr/~parisse/debian/dists/stable/main/source/giac_${version}.tar.gz";
-    sha256 = "sha256-c5A9/I6L/o3Y3dxEPoTKpw/fJqYMr6euLldaQ1HWT5c=";
+    sha256 = "sha256-EP8wRi8QZPrr1lfKN6da87s1FCy8AuDYbzcvsJCWyLE=";
   };
 
   patches = [
@@ -32,18 +32,21 @@ stdenv.mkDerivation rec {
     })
   ];
 
+  # 1.9.0-5's tarball contains a binary (src/mkjs) which is executed
+  # at build time. we will delete and rebuild it.
+  depsBuildBuild = [ buildPackages.stdenv.cc ];
+
   postPatch = ''
     for i in doc/*/Makefile* micropython*/xcas/Makefile*; do
       substituteInPlace "$i" --replace "/bin/cp" "cp";
     done;
-  '' +
-  # workaround for 1.6.0-47, should not be necessary in future versions
-  lib.optionalString (!enableMicroPy) ''
-    sed -i -e 's/micropython-[0-9.]* //' Makefile*
+    rm src/mkjs
+    substituteInPlace src/Makefile.am --replace "g++ mkjs.cc" \
+      "${buildPackages.stdenv.cc.targetPrefix}c++ mkjs.cc"
   '';
 
   nativeBuildInputs = [
-    texlive.combined.scheme-small bison flex
+    autoreconfHook texlive.combined.scheme-small bison flex
   ];
 
   # perl is only needed for patchShebangs fixup.
@@ -58,13 +61,6 @@ stdenv.mkDerivation rec {
     libGL libGLU fltk xorg.libX11
   ] ++ lib.optional enableMicroPy python3;
 
-  /* fixes:
-  configure:16211: checking for main in -lntl
-  configure:16230: g++ -o conftest -g -O2   conftest.cpp -lntl  -llapack -lblas -lgfortran -ldl -lpng16 -lm -lmpfi -lmpfr -lgmp  >&5
-  /nix/store/y9c1v4x7y39j2rfbg17agjwqdzxpsn18-ntl-11.3.2/lib/libntl.so: undefined reference to `pthread_key_create'
-  */
-  NIX_CFLAGS_LINK="-lpthread";
-
   # xcas Phys and Turtle menus are broken with split outputs
   # and interactive use is likely to need docs
   outputs = [ "out" ] ++ lib.optional (!enableGUI) "doc";

pkgs/applications/science/math/sage/patches/docutils-0.18.1-deprecation.patch

@@ -0,0 +1,13 @@
+diff --git a/src/sage/misc/sagedoc.py b/src/sage/misc/sagedoc.py
+index 4c56aea078..e51a77ae8a 100644
+--- a/src/sage/misc/sagedoc.py
++++ b/src/sage/misc/sagedoc.py
+@@ -1402,6 +1402,8 @@ class _sage_doc:
+             sage: identity_matrix.__doc__ in browse_sage_doc(identity_matrix, 'rst')
+             True
+             sage: browse_sage_doc(identity_matrix, 'html', False)             # optional - sphinx
++            ...
++            FutureWarning: The configuration setting "embed_images" will be removed in Docutils 1.2. Use "image_loading: link".
+             '...div...File:...Type:...Definition:...identity_matrix...'
+ 
+         In the 'text' version, double colons have been replaced with

pkgs/applications/science/math/sage/sage-src.nix

@@ -13,9 +13,14 @@ let
   # Fetch a diff between `base` and `rev` on sage's git server.
   # Used to fetch trac tickets by setting the `base` to the last release and the
   # `rev` to the last commit of the ticket.
-  fetchSageDiff = { base, name, rev, sha256, squashed ? false, ...}@args: (
+  #
+  # We don't use sage's own build system (which builds all its
+  # dependencies), so we exclude changes to "build/" from patches by
+  # default to avoid conflicts.
+  fetchSageDiff = { base, name, rev, sha256, squashed ? false, excludes ? [ "build/*" ]
+                  , ...}@args: (
     fetchpatch ({
-      inherit name sha256;
+      inherit name sha256 excludes;
 
       # There are three places to get changes from:
       #
@@ -49,11 +54,7 @@ let
                "https://github.com/sagemath/sagetrac-mirror/compare/${base}...${rev}.diff"
              ]
              else [ "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}" ];
-
-      # We don't care about sage's own build system (which builds all its dependencies).
-      # Exclude build system changes to avoid conflicts.
-      excludes = [ "build/*" ];
-    } // builtins.removeAttrs args [ "rev" "base" "sha256" "squashed" ])
+    } // builtins.removeAttrs args [ "rev" "base" "sha256" "squashed" "excludes" ])
   );
 in
 stdenv.mkDerivation rec {
@@ -172,6 +173,29 @@ stdenv.mkDerivation rec {
       rev = "8452003846a7303100847d8d0ed642fc642c11d6";
       sha256 = "sha256-A/XMouPlc2sjFp30L+56fBGJXydS2EtzfPOV98FCDqI=";
     })
+
+    # https://trac.sagemath.org/ticket/33226
+    (fetchSageDiff {
+      base = "9.6.beta0";
+      name = "giac-1.7.0-45-update.patch";
+      rev = "33ea2adf01e9e2ce9f1e33779f0b1ac0d9d1989c";
+      sha256 = "sha256-DOyxahf3+IaYdkgmAReNDCorRzMgO8+yiVrJ5TW1km0=";
+    })
+
+    # https://trac.sagemath.org/ticket/33398
+    (fetchSageDiff {
+      base = "9.6.beta4";
+      name = "sympy-1.10-update.patch";
+      rev = "6b7c3a28656180e42163dc10f7b4a571b93e5f27";
+      sha256 = "sha256-fnUyM2yjHkCykKRfzQQ4glcUYmCS/fYzDzmCf0nuebk=";
+      # The patch contains a whitespace change to a file that didn't exist in Sage 9.5.
+      excludes = [ "build/*" "src/sage/manifolds/vector_bundle_fiber_element.py" ];
+    })
+
+    # docutils 0.18.1 now triggers Sphinx warnings. tolerate them for
+    # now, because patching Sphinx is not feasible.
+    # https://github.com/sphinx-doc/sphinx/issues/9777#issuecomment-1104481271
+    ./patches/docutils-0.18.1-deprecation.patch
   ];
 
   patches = nixPatches ++ bugfixPatches ++ packageUpgradePatches;

pkgs/development/compilers/qbe/default.nix

@@ -6,12 +6,12 @@
 
 stdenv.mkDerivation rec {
   pname = "qbe";
-  version = "unstable-2022-03-17";
+  version = "unstable-2022-04-11";
 
   src = fetchgit {
     url = "git://c9x.me/qbe.git";
-    rev = "c6b41eb8c8cece8266b2173a83216e1ce77eb2be";
-    sha256 = "sha256-vpNZNED+C9VMzWyyyntQuBgTvbpZpJ/EwOztdOEP7vI=";
+    rev = "2caa26e388b1c904d2f12fb09f84df7e761d8331";
+    sha256 = "sha256-TNKHKX/PbrNIQJ+Q50KemfcigEBKe7gmJzTjB6ofYL8=";
   };
 
   makeFlags = [ "PREFIX=$(out)" ];

pkgs/development/interpreters/wasmtime/default.nix

@@ -2,17 +2,17 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "wasmtime";
-  version = "0.35.2";
+  version = "0.36.0";
 
   src = fetchFromGitHub {
     owner = "bytecodealliance";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-4oZglk7MInLIsvbeCfs4InAcmSmzZp16XL5+8eoYXJk=";
+    sha256 = "sha256-nSA78eQRbJ5JTDquaRqRgFU0V8RVCzvWUONgHxGj+Mc=";
     fetchSubmodules = true;
   };
 
-  cargoSha256 = "sha256-IqFOw9bGdM3IEoMeqDlxKfLnZvR80PSnwP9kr1tI/h0=";
+  cargoSha256 = "sha256-/+uioJRXiugsV7SUwsDNHGaPxrxrhscQUGyXOzzwG/g=";
 
   # This environment variable is required so that when wasmtime tries
   # to run tests by using the rusty_v8 crate, it does not try to

pkgs/development/libraries/science/math/magma/default.nix

@@ -8,7 +8,7 @@ assert let majorIs = lib.versions.major cudatoolkit.version;
        in majorIs == "9" || majorIs == "10" || majorIs == "11";
 
 let
-  version = "2.5.4";
+  version = "2.6.2";
 
   # We define a specific set of CUDA compute capabilities here,
   # because CUDA 11 does not support compute capability 3.0. Also,
@@ -45,7 +45,7 @@ in stdenv.mkDerivation {
   inherit version;
   src = fetchurl {
     url = "https://icl.cs.utk.edu/projectsfiles/magma/downloads/magma-${version}.tar.gz";
-    sha256 = "0rrvd21hczxlm8awc9z54fj7iqpjmsb518fy32s6ghz0g90znd3p";
+    hash = "sha256-dbVU2rAJA+LRC5cskT5Q5/iMvGLzrkMrWghsfk7aCnE=";
     name = "magma-${version}.tar.gz";
   };
 
@@ -64,23 +64,6 @@ in stdenv.mkDerivation {
   enableParallelBuilding=true;
   buildFlags = [ "magma" "magma_sparse" ];
 
-  # MAGMA's default CMake setup does not care about installation. So we copy files directly.
-  installPhase = ''
-    mkdir -p $out
-    mkdir -p $out/include
-    mkdir -p $out/lib
-    mkdir -p $out/lib/pkgconfig
-    cp -a ../include/*.h $out/include
-    #cp -a sparse-iter/include/*.h $out/include
-    cp -a lib/*.so $out/lib
-    cat ../lib/pkgconfig/magma.pc.in                   | \
-    sed -e s:@INSTALL_PREFIX@:"$out":          | \
-    sed -e s:@CFLAGS@:"-I$out/include":    | \
-    sed -e s:@LIBS@:"-L$out/lib -lmagma -lmagma_sparse": | \
-    sed -e s:@MAGMA_REQUIRED@::                       \
-        > $out/lib/pkgconfig/magma.pc
-  '';
-
   meta = with lib; {
     description = "Matrix Algebra on GPU and Multicore Architectures";
     license = licenses.bsd3;

pkgs/development/python-modules/adafruit-io/default.nix

@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "adafruit-io";
-  version = "2.6.0";
+  version = "2.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -18,8 +18,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "adafruit";
     repo = "Adafruit_IO_Python";
-    rev = version;
-    hash = "sha256-tjm+HvUuLK3IxXwuxPidJaBetj+n0BzKOuLj75bM7a8=";
+    rev = "refs/tags/${version}";
+    hash = "sha256-BIquSrhtRv2NEOn/G6TTfYMrL2OBwwJQYZ455fznwdU=";
   };
 
   SETUPTOOLS_SCM_PRETEND_VERSION = version;

pkgs/development/python-modules/aioconsole/default.nix

@@ -40,6 +40,8 @@ buildPythonPackage rec {
 
   disabledTests = [
     "test_interact_syntax_error"
+    # Output and the sandbox don't work well together
+    "test_interact_multiple_indented_lines"
   ];
 
   pythonImportsCheck = [

pkgs/development/python-modules/boschshcpy/default.nix

@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "boschshcpy";
-  version = "0.2.31";
+  version = "0.2.32";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "tschamm";
     repo = pname;
     rev = version;
-    sha256 = "sha256-04qTjwnPckBHKBs9+BFWtTJ9uVc0U1oJAiLIE1nqQdE=";
+    sha256 = "sha256-tJlgmxa6HppLLTs4ZggnJ5H6NOH3v+C9pUfLBmxr4XY=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/dataset/default.nix

@@ -1,22 +1,28 @@
 { lib
-, buildPythonPackage
-, fetchPypi
-, sqlalchemy
 , alembic
 , banal
+, buildPythonPackage
+, fetchPypi
+, pythonOlder
+, sqlalchemy
 }:
 
 buildPythonPackage rec {
   pname = "dataset";
   version = "1.5.2";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-TDZ6fAqFxOdI79o07uMAw/zD8HbHXDKQt0mnoFM1yEc=";
+    hash = "sha256-TDZ6fAqFxOdI79o07uMAw/zD8HbHXDKQt0mnoFM1yEc=";
   };
 
   propagatedBuildInputs = [
-    sqlalchemy alembic banal
+    alembic
+    banal
+    sqlalchemy
   ];
 
   # checks attempt to import nonexistent module 'test.test' and fail
@@ -30,6 +36,6 @@ buildPythonPackage rec {
     description = "Toolkit for Python-based database access";
     homepage = "https://dataset.readthedocs.io";
     license = licenses.mit;
-    maintainers = [ maintainers.xfnw ];
+    maintainers = with maintainers; [ xfnw ];
   };
 }

pkgs/development/python-modules/datasets/default.nix

@@ -1,15 +1,19 @@
 { lib
+, aiohttp
 , buildPythonPackage
-, fetchFromGitHub
 , dill
-, filelock
+, fetchFromGitHub
 , fsspec
 , huggingface-hub
+, importlib-metadata
 , multiprocess
 , numpy
+, packaging
 , pandas
 , pyarrow
+, pythonOlder
 , requests
+, responses
 , tqdm
 , xxhash
 }:
@@ -17,26 +21,33 @@
 buildPythonPackage rec {
   pname = "datasets";
   version = "1.18.3";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
 
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = pname;
     rev = version;
-    sha256 = "sha256-2x6DpsDcVF2O5iJKeMEGw/aJwZPc7gSGaK2947c3B6s=";
+    hash = "sha256-2x6DpsDcVF2O5iJKeMEGw/aJwZPc7gSGaK2947c3B6s=";
   };
 
   propagatedBuildInputs = [
+    aiohttp
     dill
-    filelock
     fsspec
     huggingface-hub
     multiprocess
     numpy
+    packaging
     pandas
     pyarrow
     requests
+    responses
     tqdm
     xxhash
+  ] ++ lib.optionals (pythonOlder "3.8") [
+    importlib-metadata
   ];
 
   # Tests require pervasive internet access.
@@ -45,11 +56,13 @@ buildPythonPackage rec {
   # Module import will attempt to create a cache directory.
   postFixup = "export HF_MODULES_CACHE=$TMPDIR";
 
-  pythonImportsCheck = [ "datasets" ];
+  pythonImportsCheck = [
+    "datasets"
+  ];
 
   meta = with lib; {
+    description = "Open-access datasets and evaluation metrics for natural language processing";
     homepage = "https://github.com/huggingface/datasets";
-    description = "Fast, efficient, open-access datasets and evaluation metrics for natural language processing";
     changelog = "https://github.com/huggingface/datasets/releases/tag/${version}";
     license = licenses.asl20;
     platforms = platforms.unix;

pkgs/development/python-modules/ibis-framework/default.nix

@@ -58,7 +58,7 @@ buildPythonPackage rec {
     repo = "ibis";
     owner = "ibis-project";
     rev = version;
-    sha256 = "sha256-n3fR6wvcSfIo7760seB+5SxtoYSqQmqkzZ9VlNQF200=";
+    hash = "sha256-n3fR6wvcSfIo7760seB+5SxtoYSqQmqkzZ9VlNQF200=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -94,7 +94,8 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace 'atpublic = ">=2.3,<3"' 'atpublic = ">=2.3"'
+      --replace 'atpublic = ">=2.3,<3"' 'atpublic = ">=2.3"' \
+      --replace 'regex = "^2021.7.6"' 'regex = "*"'
   '';
 
   preBuild = ''

pkgs/development/python-modules/impacket/default.nix

@@ -1,20 +1,46 @@
-{ lib, buildPythonPackage, fetchPypi, flask, ldapdomaindump, pycryptodomex, pyasn1, pyopenssl, chardet, setuptools }:
+{ lib
+, buildPythonPackage
+, chardet
+, fetchPypi
+, flask
+, ldapdomaindump
+, pyasn1
+, pycryptodomex
+, pyopenssl
+, pythonOlder
+, setuptools
+, six
+}:
 
 buildPythonPackage rec {
   pname = "impacket";
   version = "0.9.24";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "18d557d387f4914fafa739813b9172bc3f8bd9c036e93bf589a8e0ebb7304bba";
+    hash = "sha256-GNVX04f0kU+vpzmBO5FyvD+L2cA26Tv1iajg67cwS7o=";
   };
 
-  propagatedBuildInputs = [ flask ldapdomaindump pycryptodomex pyasn1 pyopenssl chardet setuptools ];
+  propagatedBuildInputs = [
+    chardet
+    flask
+    ldapdomaindump
+    pyasn1
+    pycryptodomex
+    pyopenssl
+    setuptools
+    six
+  ];
 
-  # fail with:
   # RecursionError: maximum recursion depth exceeded
   doCheck = false;
-  pythonImportsCheck = [ "impacket" ];
+
+  pythonImportsCheck = [
+    "impacket"
+  ];
 
   meta = with lib; {
     description = "Network protocols Constructors and Dissectors";

pkgs/development/python-modules/invocations/default.nix

@@ -1,11 +1,12 @@
-{ buildPythonPackage
+{ lib
+, buildPythonPackage
 , blessings
 , fetchFromGitHub
 , invoke
-, lib
 , releases
 , semantic-version
 , tabulate
+, tqdm
 , twine
 }:
 
@@ -27,12 +28,22 @@ buildPythonPackage rec {
       --replace "tabulate==0.7.5" "tabulate"
   '';
 
-  propagatedBuildInputs = [ blessings invoke releases semantic-version tabulate twine ];
+  propagatedBuildInputs = [
+    blessings
+    invoke
+    releases
+    semantic-version
+    tabulate
+    tqdm
+    twine
+  ];
 
   # There's an error loading the test suite. See https://github.com/pyinvoke/invocations/issues/29.
   doCheck = false;
 
-  pythonImportsCheck = [ "invocations" ];
+  pythonImportsCheck = [
+    "invocations"
+  ];
 
   meta = with lib; {
     description = "Common/best-practice Invoke tasks and collections";

pkgs/development/python-modules/md-toc/default.nix

@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "md-toc";
-  version = "8.1.2";
+  version = "8.1.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.5";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "frnmst";
     repo = pname;
     rev = version;
-    sha256 = "sha256-EmhCZhxUCzBMqScPeawvcWmP9rrthow1vhTZachjCDI=";
+    sha256 = "sha256-/Hi2CW3aqbvCr7xGHD9lAe9U84waSjVfTfWq76NXNT4=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/mdurl/default.nix

@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "mdurl";
-  version = "0.1.0";
+  version = "0.1.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "hukkin";
     repo = pname;
     rev = version;
-    sha256 = "sha256-AVklWFc4o5R9OzS9BYauuOaxm89P/Ih5l3Vrb2P0El4=";
+    sha256 = "sha256-SBJSs+i+I0jF90i3o6BUgLCDR6Et34fXEmQ7fbDoAbA=";
   };
 
   nativeBuildInputs = [

pkgs/development/python-modules/parsimonious/default.nix

@@ -3,6 +3,7 @@
 , fetchPypi
 , regex
 , pytestCheckHook
+, pythonOlder
 }:
 
 buildPythonPackage rec {
@@ -10,9 +11,11 @@ buildPythonPackage rec {
   version = "0.9.0";
   format = "setuptools";
 
+  disabled = pythonOlder "3.7";
+
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-sq0a5jovZb149eCorFEKmPNgekPx2yqNRmNqXZ5KMME=";
+    hash = "sha256-sq0a5jovZb149eCorFEKmPNgekPx2yqNRmNqXZ5KMME=";
   };
 
   propagatedBuildInputs = [
@@ -23,6 +26,11 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "regex>=2022.3.15" "regex"
+  '';
+
   pythonImportsCheck = [
     "parsimonious"
     "parsimonious.grammar"
@@ -30,9 +38,9 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
+    description = "Arbitrary-lookahead parser";
     homepage = "https://github.com/erikrose/parsimonious";
-    description = "Fast arbitrary-lookahead parser written in pure Python";
     license = licenses.mit;
+    maintainers = with maintainers; [ ];
   };
-
 }

pkgs/development/python-modules/policyuniverse/default.nix

@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "policyuniverse";
-  version = "1.5.0.20220416";
+  version = "1.5.0.20220420";
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-RGXOqhXPsEQR5wcXDWz00J6KcdJOY5ZXSLVXT18wDDk=";
+    sha256 = "sha256-HWyzwvsn3ikL5cbEPljMHShF2vQEOSP6umk08UZgQsI=";
   };
 
   # Tests are not shipped and there are no GitHub tags

pkgs/development/python-modules/pwntools/default.nix

@@ -27,12 +27,12 @@ let
   debuggerName = lib.strings.getName debugger;
 in
 buildPythonPackage rec {
-  version = "4.7.0";
+  version = "4.8.0";
   pname = "pwntools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-dDiOKGdeehkp92PfWhzsaj1YlkEEm2z0drscVuxQqI4=";
+    sha256 = "sha256-QgUuLYg3EOTh2gQekWdabXGftOXvLdJFyyhT2hEmkpA=";
   };
 
   postPatch = ''

pkgs/development/python-modules/rfc6555/default.nix

@@ -2,7 +2,7 @@
 , buildPythonPackage
 , fetchFromGitHub
 , pytestCheckHook
-, selectors2
+, pythonOlder
 }:
 
 buildPythonPackage rec {
@@ -10,17 +10,15 @@ buildPythonPackage rec {
   version = "0.1.0";
   format = "setuptools";
 
+  disabled = pythonOlder "3.7";
+
   src = fetchFromGitHub {
     owner = "sethmlarson";
     repo = pname;
     rev = "v${version}";
-    sha256 = "Lmwgusc4EQlF0GHmMTUxWzUCjBk19cvurNwbOnT+1jM=";
+    hash = "sha256-Lmwgusc4EQlF0GHmMTUxWzUCjBk19cvurNwbOnT+1jM=";
   };
 
-  propagatedBuildInputs = [
-    selectors2
-  ];
-
   checkInputs = [
     pytestCheckHook
   ];

pkgs/development/python-modules/types-dateutil/default.nix

@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "types-python-dateutil";
-  version = "2.8.11";
+  version = "2.8.12";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-7cBdC5MgGSirC1/ysxRBPdPSsk6xLEcCl++Sned8k+8=";
+    sha256 = "sha256-7zBTt0XwHERDtRK2s9WwT7ry1HaqUDtsyTIEah7fpWo=";
   };
 
   pythonImportsCheck = [ "dateutil-stubs" ];

pkgs/development/python-modules/types-decorator/default.nix

@@ -5,12 +5,12 @@
 
 buildPythonPackage rec {
   pname = "types-decorator";
-  version = "5.1.5";
+  version = "5.1.6";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-CrPgAZyBGRIrXzD0IlUkcbkc8xOLPI69krQb1d3h3QI=";
+    sha256 = "sha256-OZ+qczvJMstRtQ08odfpV7KuAvPE1xGcdpYxKCo4aKY=";
   };
 
   # Modules doesn't have tests

pkgs/development/python-modules/xdis/default.nix

@@ -1,32 +1,55 @@
-{ lib, buildPythonPackage, fetchFromGitHub, isPy27
+{ lib
+, buildPythonPackage
 , click
-, pytest
+, fetchFromGitHub
+, fetchpatch
+, pytestCheckHook
+, pythonOlder
 , six
 }:
 
 buildPythonPackage rec {
   pname = "xdis";
-  version = "6.0.3";
-  disabled = isPy27;
+  version = "unstable-2022-04-13";
+  format = "setuptools";
+
+  disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "rocky";
     repo = "python-xdis";
-    rev = version;
-    sha256 = "1qvg3bwqzqxlzlixz2di3si7siy0ismq93wd57r8cqmxl54gva6h";
+    # Support for later Python releases is missing in 6.0.3
+    rev = "f888df7df5cb8839927e9187c258769cc77fb7a3";
+    hash = "sha256-V1ws5GibRkutFRNcjlP7aW+AshSyWavXIxuwznVbRlU=";
   };
 
-  checkInputs = [ pytest ];
-  propagatedBuildInputs = [ six click ];
+  propagatedBuildInputs = [
+    click
+    six
+  ];
 
-  checkPhase = ''
-    make check
-  '';
-  pythonImportsCheck = [ "xdis" ];
+  checkInputs = [
+    pytestCheckHook
+  ];
+
+  pythonImportsCheck = [
+    "xdis"
+  ];
+
+  disabledTestPaths = [
+    # Our Python release is not in the test matrix
+    "test_unit/test_disasm.py"
+  ];
+
+  disabledTests = [
+    "test_big_linenos"
+    "test_basic"
+  ];
 
   meta = with lib; {
     description = "Python cross-version byte-code disassembler and marshal routines";
     homepage = "https://github.com/rocky/python-xdis/";
     license = licenses.gpl2Plus;
+    maintainers = with maintainers; [ ];
   };
 }

pkgs/development/tools/analysis/checkov/default.nix

@@ -32,13 +32,13 @@ with py.pkgs;
 
 buildPythonApplication rec {
   pname = "checkov";
-  version = "2.0.1068";
+  version = "2.0.1075";
 
   src = fetchFromGitHub {
     owner = "bridgecrewio";
     repo = pname;
     rev = version;
-    hash = "sha256-/WJiGWBGcVDoiX+FnEbIFaMRxQSnJTqLqHbKlEoCqWU=";
+    hash = "sha256-5KAmIJngrs4nvjLJsaUrbgZsMFe0eTTDiwquyguvKLI=";
   };
 
   nativeBuildInputs = with py.pkgs; [

pkgs/development/tools/continuous-integration/gitlab-runner/default.nix

@@ -1,7 +1,7 @@
 { lib, buildGoModule, fetchFromGitLab, fetchurl }:
 
 let
-  version = "14.9.1";
+  version = "14.10.0";
 in
 buildGoModule rec {
   inherit version;
@@ -20,7 +20,7 @@ buildGoModule rec {
     owner = "gitlab-org";
     repo = "gitlab-runner";
     rev = "v${version}";
-    sha256 = "1h6fyhbc154fr6a8brva3clirgvga6sal6ikylf9mbkxbh7d9rcn";
+    sha256 = "033b68hwqk5hn2by4hk1z7v6p08d505grl9hrx72p4wpyk18c80l";
   };
 
   patches = [

pkgs/development/tools/gotestsum/default.nix

@@ -2,13 +2,13 @@
 
 buildGoModule rec {
   pname = "gotestsum";
-  version = "1.7.0";
+  version = "1.8.0";
 
   src = fetchFromGitHub {
     owner = "gotestyourself";
     repo = "gotestsum";
     rev = "v${version}";
-    sha256 = "sha256-nZaVi39dOytJTM69xpl+d9XoUt+yHdndPgY2ggfNeMQ=";
+    sha256 = "sha256-6GEkuVa6RCMv0FsTYXhhscVe3Ya78qwbj7Im9AL0fOo=";
   };
 
   vendorSha256 = "sha256-wP5y8Ec6eSe+rdMEQQdX0fFTQ0HWuiyBRHxGlraZd+o=";

pkgs/games/heroic/default.nix

@@ -2,11 +2,11 @@
 
 let
   pname = "heroic";
-  version = "2.2.1";
+  version = "2.2.6";
   name = "${pname}-${version}";
   src = fetchurl {
     url = "https://github.com/Heroic-Games-Launcher/HeroicGamesLauncher/releases/download/v${version}/Heroic-${version}.AppImage";
-    sha256 = "sha256-zzxf3eM1fUWTVtzzABcwlmptNuCVQafvotnbOiCzu0c=";
+    sha256 = "sha256-kL30/G4DpDPwGN7PvbWest7TcgL4Rd1c2OM4nRCT3bg=";
   };
   appimageContents = appimageTools.extractType2 { inherit name src; };
 

pkgs/servers/monitoring/grafana-agent/default.nix

@@ -2,20 +2,20 @@
 
 buildGoModule rec {
   pname = "grafana-agent";
-  version = "0.21.2";
+  version = "0.24.1";
 
   src = fetchFromGitHub {
     rev = "v${version}";
     owner = "grafana";
     repo = "agent";
-    sha256 = "sha256-s++21feD3L2HuVYFjWhNIOGTjjX+lXwURc4PqbwFnhI=";
+    sha256 = "sha256-WxULVtqKxYXMWNY4l0wvTkqcDkPrlHcS70NgQhe8nzU=";
   };
 
-  vendorSha256 = "sha256-kxLtbElzfimC/ZefUyTlfQiUZo4y0f1riajRm5shVdU=";
+  vendorSha256 = "sha256-hdo8uiVJAMMPo1N8kLDFPSbyTr5WxNKtq8E7pj6Plak=";
 
-  patches = [
-    # https://github.com/grafana/agent/issues/731
-    ./skip_test_requiring_network.patch
+  tags = [
+    "nonetwork"
+    "nodocker"
   ];
 
   # uses go-systemd, which uses libsystemd headers

pkgs/servers/monitoring/grafana-agent/skip_test_requiring_network.patch

@@ -1,15 +0,0 @@
-diff --git a/pkg/operator/selector_eventhandler_test.go b/pkg/operator/selector_eventhandler_test.go
-index 7b6ec602..e79bae0e 100644
---- a/pkg/operator/selector_eventhandler_test.go
-+++ b/pkg/operator/selector_eventhandler_test.go
-@@ -39,6 +39,10 @@ var (
- // TestEnqueueRequestForSelector creates an example Kubenretes cluster and runs
- // EnqueueRequestForSelector to validate it works.
- func TestEnqueueRequestForSelector(t *testing.T) {
-+	// Requires network access, which is not available during
-+	// the nixpkgs sandboxed build
-+	t.Skip()
-+
- 	l := log.NewNopLogger()
- 
- 	ctx, cancel := context.WithTimeout(context.Background(), 5*time.Minute)

pkgs/tools/admin/realvnc-vnc-viewer/default.nix

@@ -2,16 +2,16 @@
 
 stdenv.mkDerivation rec {
   pname = "realvnc-vnc-viewer";
-  version = "6.21.1109";
+  version = "6.22.207";
 
   src = {
     "x86_64-linux" = fetchurl {
       url = "https://www.realvnc.com/download/file/viewer.files/VNC-Viewer-${version}-Linux-x64.rpm";
-      sha256 = "12zxp9kvi070nzxbrnrfsyla38ryb69zlidw6cvypmsgqnylfxj7";
+      sha256 = "0jybfqj1svkb297ahyp07xf4b8qyb5h1l2kp50a50ivb6flqd3jr";
     };
     "i686-linux" = fetchurl {
       url = "https://www.realvnc.com/download/file/viewer.files/VNC-Viewer-${version}-Linux-x86.rpm";
-      sha256 = "03vhdmzyd16r0kdxpkq9azyy1h705lk4sbgnbw5fr8gkifwng60f";
+      sha256 = "06jmkd474nql6p3hnqwnwj5ac29m2021flnvf44mfhrhaa5wnpz6";
     };
   }.${stdenv.system} or (throw "Unsupported system: ${stdenv.hostPlatform.system}");
 

pkgs/tools/misc/melody/default.nix

@@ -2,15 +2,15 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "melody";
-  version = "0.13.9";
+  version = "0.13.10";
 
   src = fetchCrate {
     pname = "melody_cli";
     inherit version;
-    sha256 = "1vqiciridm0pbh5yf42p2jfis908p6r9q3jaqy2hx3f5aggbf09q";
+    sha256 = "05slrh5dqbpsvimdr0rlhj04kf1qzwij3zlardvbmvhvfccf4188";
   };
 
-  cargoSha256 = "1gf2km06qzvc0xv4vfxm6vdp3c5lgcjwwl92f4frga3cx51vbrzh";
+  cargoSha256 = "0qh1byysbc6pl3cvx2vdpl8crx5id59hhrwqzk5g7091spm8wf79";
 
   meta = with lib; {
     description = "Language that compiles to regular expressions";

pkgs/tools/misc/pmbootstrap/default.nix

@@ -3,11 +3,11 @@
 
 buildPythonApplication rec {
   pname = "pmbootstrap";
-  version = "1.41.0";
+  version = "1.43.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-go3EXmC9Vp0xXi1mH65p85FKsTe0CbyNXw3VVRrnpeQ=";
+    sha256 = "sha256-4bPxWmzlyVZrkq9qs/5t+ZOsVDkAAwYc6Mc4een4Qnw=";
   };
 
   repo = fetchFromGitLab {
@@ -15,7 +15,7 @@ buildPythonApplication rec {
     owner = "postmarketOS";
     repo = pname;
     rev = version;
-    sha256 = "sha256-7Y4rxSdJQaIlq4yiadvrEro0JM5xoHeISDKHz69T4z8=";
+    sha256 = "sha256-jbTzPGrRVisLG7f4NspkDVB8NYSyyInHkhSUPO3dgU0=";
   };
 
   pmb_test = "${repo}/test";

pkgs/tools/networking/weighttp/default.nix

@@ -1,23 +0,0 @@
-{ lib, stdenv, fetchgit, python2, libev, wafHook }:
-
-stdenv.mkDerivation rec {
-  pname = "weighttp";
-  version = "0.4";
-
-  src = fetchgit {
-    url = "https://git.lighttpd.net/weighttp.git";
-    rev = "refs/tags/weighttp-${version}";
-    sha256 = "14yjmdx9p8g8c3zlrx5qid8k156lsagfwhl3ny54162nxjf7kzgr";
-  };
-
-  nativeBuildInputs = [ wafHook ];
-
-  buildInputs = [ python2 libev ];
-
-  meta = with lib; {
-    description = "Lightweight and simple webserver benchmarking tool";
-    homepage = "https://redmine.lighttpd.net/projects/weighttp/wiki";
-    platforms = platforms.unix;
-    license = licenses.mit;
-  };
-}

pkgs/tools/security/gitleaks/default.nix

@@ -5,16 +5,16 @@
 
 buildGoModule rec {
   pname = "gitleaks";
-  version = "8.7.0";
+  version = "8.7.2";
 
   src = fetchFromGitHub {
     owner = "zricethezav";
     repo = pname;
     rev = "v${version}";
-    sha256 = "sha256-4ED7xmwbFXs6OnCtG+xrY50kBsgESxw/a8slhWOo+30=";
+    sha256 = "sha256-V2wBzoU3oL/wT/pIvMxEPTuNaRLTI72OTDRgWXyzZoY=";
   };
 
-  vendorSha256 = "sha256-ls6zuouCAmE3y9011CK1YADy/v87Ft8tb85LyJ4bEF4=";
+  vendorSha256 = "sha256-X8z9iKRR3PptNHwy1clZG8QsClsjbW45nZb2fHGfSYk=";
 
   ldflags = [
     "-s"

pkgs/tools/security/maigret/default.nix

@@ -5,13 +5,13 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "maigret";
-  version = "0.4.2";
+  version = "0.4.3";
 
   src = fetchFromGitHub {
     owner = "soxoj";
     repo = pname;
-    rev = "v${version}";
-    sha256 = "sha256-XML7sb/dhMX9i8GzOezanVTFha73v2m1OVOYvSOelNQ=";
+    rev = "refs/tags/v${version}";
+    sha256 = "sha256-0Ni4rXVu3ZQyHBvD3IpV0i849CnumLj+n6/g4sMhHEs=";
   };
 
   propagatedBuildInputs = with python3.pkgs; [

pkgs/top-level/aliases.nix

@@ -1339,6 +1339,7 @@ mapAliases ({
   webbrowser = throw "webbrowser was removed because it's unmaintained upstream and was marked as broken in nixpkgs for over a year"; # Added 2022-03-21
   webkit = throw "'webkit' has been renamed to/replaced by 'webkitgtk'"; # Converted to throw 2022-02-22
   weechat-matrix-bridge = throw "'weechat-matrix-bridge' has been renamed to/replaced by 'weechatScripts.weechat-matrix-bridge'"; # Converted to throw 2022-02-22
+  weighttp = throw "weighttp has been removed: abandoned by upstream"; # Added 2022-04-20
   whirlpool-gui = throw "whirlpool-gui has been removed as it depended on an insecure version of Electron"; # added 2022-02-08
   wicd = throw "wicd has been removed as it is abandoned"; # Added 2021-09-11
   wineFull = throw "'wineFull' has been renamed to/replaced by 'winePackages.full'"; # Converted to throw 2022-02-22

pkgs/top-level/all-packages.nix

@@ -11546,8 +11546,6 @@ with pkgs;
 
   webalizer = callPackage ../tools/networking/webalizer { };
 
-  weighttp = callPackage ../tools/networking/weighttp { };
-
   wget = callPackage ../tools/networking/wget {
     libpsl = null;
   };