diff --git a/pkgs/applications/science/biology/hh-suite/default.nix b/pkgs/applications/science/biology/hh-suite/default.nix index 2e01ace7d0f1..76c6544b3430 100644 --- a/pkgs/applications/science/biology/hh-suite/default.nix +++ b/pkgs/applications/science/biology/hh-suite/default.nix @@ -1,6 +1,7 @@ { lib , stdenv , fetchFromGitHub +, fetchpatch , cmake , xxd , enableMpi ? false @@ -18,6 +19,15 @@ stdenv.mkDerivation rec { hash = "sha256-kjNqJddioCZoh/cZL3YNplweIGopWIGzCYQOnKDqZmw="; }; + patches = [ + # Should be removable as soon as this upstream PR is merged: https://github.com/soedinglab/hh-suite/pull/357 + (fetchpatch { + name = "fix-gcc13-build-issues.patch"; + url = "https://github.com/soedinglab/hh-suite/commit/cec47cba5dcd580e668b1ee507c9282fbdc8e7d7.patch"; + hash = "sha256-Msdmj9l8voPYXK0SSwUA6mEbFLBhTjjE/Kjp0VL4Kf4="; + }) + ]; + nativeBuildInputs = [ cmake xxd ]; cmakeFlags = lib.optional stdenv.hostPlatform.isx86 "-DHAVE_SSE2=1" ++ lib.optional stdenv.hostPlatform.isAarch "-DHAVE_ARM8=1"