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Merge pull request #299223 from NixOS/python-updates 

[python-updates] 2024-03-24 - selective updates
This commit is contained in:
Martin Weinelt 2024-03-28 05:01:55 +01:00 committed by GitHub
parent 64f4bdb7e1 2a1c9c5062
commit ea1480099d
No known key found for this signature in database
GPG Key ID: B5690EEEBB952194
219 changed files with 867 additions and 766 deletions
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8
pkgs/applications/audio/miniplayer/default.nix
View File

@ -15,7 +15,11 @@ buildPythonApplication rec {
hash = "sha256-iUUsVIDLQAiaMomfA2LvvJZ2ePhgADtC6GCwIpRC1MA=";
};
propagatedBuildInputs = [
build-system = [
setuptools
];
dependencies = [
colorthief
ffmpeg-python
mpd2
@ -25,6 +29,8 @@ buildPythonApplication rec {
ueberzug
];
doCheck = false; # no tests
# pythonImportsCheck is disabled because this package doesn't expose any modules.
meta = with lib; {

5
pkgs/applications/misc/electron-cash/default.nix
View File

@ -12,6 +12,10 @@ python3Packages.buildPythonApplication rec {
sha256 = "sha256-xOyj5XerOwgfvI0qj7+7oshDvd18h5IeZvcJTis8nWo=";
};
build-system = with python3Packages; [
cython
];
propagatedBuildInputs = with python3Packages; [
# requirements
pyaes
@ -36,7 +40,6 @@ python3Packages.buildPythonApplication rec {
cryptography
# requirements-hw
cython
trezor
keepkey
btchip-python

2
pkgs/applications/science/biology/macs2/default.nix
View File

@ -21,7 +21,7 @@ python3.pkgs.buildPythonPackage rec {
];
nativeBuildInputs = with python3.pkgs; [
cython
cython_0
numpy
setuptools
wheel

4
pkgs/applications/science/math/sage/python-modules/sage-setup.nix
View File

@ -1,7 +1,7 @@
{ lib
, buildPythonPackage
, sage-src
, cython_3
, cython
, jinja2
, pkgconfig # the python module, not the pkg-config alias
}:
@ -11,7 +11,7 @@ buildPythonPackage rec {
pname = "sage-setup";
src = sage-src;
nativeBuildInputs = [ cython_3 ];
nativeBuildInputs = [ cython ];
buildInputs = [ pkgconfig ];
propagatedBuildInputs = [ jinja2 ];

4
pkgs/applications/science/math/sage/sagelib.nix
View File

@ -48,7 +48,7 @@
, cvxopt
, cypari2
, cysignals
, cython_3
, cython
, fpylll
, gmpy2
, importlib-metadata
@ -153,7 +153,7 @@ buildPythonPackage rec {
cvxopt
cypari2
cysignals
cython_3
cython
fpylll
gmpy2
importlib-metadata

2
pkgs/applications/version-management/commitizen/default.nix
View File

@ -55,7 +55,7 @@ python3.pkgs.buildPythonApplication rec {
pytest-freezer
pytest-mock
pytest-regressions
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
];
doCheck = true;

2
pkgs/applications/version-management/git-up/default.nix
View File

@ -30,7 +30,7 @@ pythonPackages.buildPythonApplication rec {
nativeCheckInputs = [
git
pythonPackages.pytestCheckHook
pythonPackages.pytest7CheckHook
];
# 1. git fails to run as it cannot detect the email address, so we set it

2
pkgs/applications/virtualization/virt-manager/default.nix
View File

@ -76,7 +76,7 @@ python3.pkgs.buildPythonApplication rec {
'';
nativeCheckInputs = with python3.pkgs; [
pytestCheckHook
pytest7CheckHook
cpio
cdrtools
xorriso

1
pkgs/by-name/pr/pretalx/package.nix
View File

@ -86,6 +86,7 @@ python.pkgs.buildPythonApplication rec {
pythonRelaxDeps = [
"django-csp"
"django-filter"
"python-dateutil"
];

2
pkgs/by-name/pr/pretix/package.nix
View File

@ -94,6 +94,7 @@ python.pkgs.buildPythonApplication rec {
--replace-fail psycopg2-binary psycopg2 \
--replace-fail vat_moss_forked==2020.3.20.0.11.0 vat-moss \
--replace-fail "bleach==5.0.*" bleach \
--replace-fail "django-filter==23.5" django-filter \
--replace-fail "dnspython==2.5.*" dnspython \
--replace-fail "importlib_metadata==7.*" importlib_metadata \
--replace-fail "protobuf==4.25.*" protobuf \
@ -107,7 +108,6 @@ python.pkgs.buildPythonApplication rec {
build-system = with python.pkgs; [
gettext
nodejs
pythonRelaxDepsHook
setuptools
tomli
];

1
pkgs/desktops/gnome/misc/gnome-extensions-cli/default.nix
View File

@ -33,6 +33,7 @@ buildPythonApplication rec {
pythonRelaxDeps = [
"more-itertools"
"packaging"
];
propagatedBuildInputs = [

1
pkgs/development/compilers/vyper/default.nix
View File

@ -57,6 +57,7 @@ buildPythonPackage rec {
pythonRelaxDeps = [
"asttokens"
"packaging"
];
propagatedBuildInputs = [

5
pkgs/development/python-modules/accelerate/default.nix
View File

@ -3,8 +3,7 @@
, buildPythonPackage
, fetchFromGitHub
, pythonOlder
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, setuptools
, numpy
, packaging
@ -47,7 +46,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
evaluate
parameterized
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
transformers
];
preCheck = ''

4
pkgs/development/python-modules/aioesphomeapi/default.nix
View File

@ -4,7 +4,7 @@
, pythonOlder
# build-system
, cython_3
, cython
, setuptools
# dependencies
@ -39,7 +39,7 @@ buildPythonPackage rec {
build-system = [
setuptools
cython_3
cython
];
dependencies = [

5
pkgs/development/python-modules/aiohttp/default.nix
View File

@ -21,8 +21,7 @@
, freezegun
, gunicorn
, pytest-mock
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, python-on-whales
, re-assert
, trustme
@ -83,7 +82,7 @@ buildPythonPackage rec {
freezegun
gunicorn
pytest-mock
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
python-on-whales
re-assert
] ++ lib.optionals (!(stdenv.isDarwin && stdenv.isAarch64)) [

4
pkgs/development/python-modules/alembic/default.nix
View File

@ -14,7 +14,7 @@
, typing-extensions
# tests
, pytestCheckHook
, pytest7CheckHook
, pytest-xdist
, python-dateutil
}:
@ -49,7 +49,7 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
pytest7CheckHook
pytest-xdist
python-dateutil
];

13
pkgs/development/python-modules/anytree/default.nix
View File

@ -4,7 +4,7 @@
, fontconfig
, graphviz
, poetry-core
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, six
, substituteAll
@ -13,7 +13,7 @@
buildPythonPackage rec {
pname = "anytree";
version = "2.12.0";
version = "2.12.1";
format = "pyproject";
disabled = pythonOlder "3.7";
@ -22,7 +22,7 @@ buildPythonPackage rec {
owner = "c0fec0de";
repo = "anytree";
rev = "refs/tags/${version}";
hash = "sha256-8mV9Lf6NLPUDVurXCxG+tqe7+3TrIn2H+7tHa6BpTzk=";
hash = "sha256-5HU8kR3B2RHiGBraQ2FTgVtGHJi+Lha9U/7rpNsYCCI=";
};
patches = lib.optionals withGraphviz [
@ -41,12 +41,7 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
pytest7CheckHook
];
# Tests print “Fontconfig error: Cannot load default config file”

12
pkgs/development/python-modules/apsw/default.nix
View File

@ -1,6 +1,7 @@
{ lib
, buildPythonPackage
, fetchFromGitHub
, setuptools
, sqlite
, isPyPy
, python
@ -8,8 +9,8 @@
buildPythonPackage rec {
pname = "apsw";
version = "3.45.1.0";
format = "setuptools";
version = "3.45.2.0";
pyproject = true;
disabled = isPyPy;
@ -17,9 +18,13 @@ buildPythonPackage rec {
owner = "rogerbinns";
repo = "apsw";
rev = "refs/tags/${version}";
hash = "sha256-NkpkciLR2TgfK/7UQHEzvQu8qRj4UJyOlGQbiV23qrc=";
hash = "sha256-tTi3/10W4OoGH6PQVhvPWc5o09on5BZrWoAvrfh4C/E=";
};
build-system = [
setuptools
];
buildInputs = [
sqlite
];
@ -36,6 +41,7 @@ buildPythonPackage rec {
];
meta = with lib; {
changelog = "https://github.com/rogerbinns/apsw/blob/${src.rev}/doc/changes.rst";
description = "A Python wrapper for the SQLite embedded relational database engine";
homepage = "https://github.com/rogerbinns/apsw";
license = licenses.zlib;

4
pkgs/development/python-modules/astropy/default.nix
View File

@ -5,7 +5,7 @@
# build time
, astropy-extension-helpers
, cython_3
, cython
, jinja2
, oldest-supported-numpy
, setuptools-scm
@ -37,7 +37,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
astropy-extension-helpers
cython_3
cython
jinja2
oldest-supported-numpy
setuptools-scm

9
pkgs/development/python-modules/aws-encryption-sdk/default.nix
View File

@ -41,16 +41,17 @@ buildPythonPackage rec {
pytestCheckHook
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTestPaths = [
# Tests require networking
"examples"
"test/integration"
];
disabledTests = [
# pytest 8 compat issue
"test_happy_version"
];
pythonImportsCheck = [
"aws_encryption_sdk"
];

6
pkgs/development/python-modules/awswrangler/default.nix
View File

@ -19,6 +19,7 @@
, pyparsing
, pytestCheckHook
, pythonOlder
, pythonRelaxDepsHook
, redshift-connector
, requests-aws4auth
}:
@ -39,6 +40,11 @@ buildPythonPackage rec {
nativeBuildInputs = [
poetry-core
pythonRelaxDepsHook
];
pythonRelaxDeps = [
"packaging"
];
propagatedBuildInputs = [

8
pkgs/development/python-modules/barectf/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchFromGitHub
, poetry-core
, pytestCheckHook
, pytest7CheckHook
, pythonRelaxDepsHook
, setuptools
, jsonschema
@ -47,11 +47,7 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
pytest7CheckHook
];
meta = with lib; {

4
pkgs/development/python-modules/betterproto/default.nix
View File

@ -10,7 +10,7 @@
, isort
, python
, pydantic
, pytestCheckHook
, pytest7CheckHook
, pytest-asyncio
, pytest-mock
, typing-extensions
@ -53,7 +53,7 @@ buildPythonPackage rec {
pydantic
pytest-asyncio
pytest-mock
pytestCheckHook
pytest7CheckHook
tomlkit
] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);

4
pkgs/development/python-modules/blis/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchFromGitHub
, setuptools
, cython
, cython_0
, hypothesis
, numpy
, pytestCheckHook
@ -38,7 +38,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
setuptools
cython
cython_0
];
propagatedBuildInputs = [

4
pkgs/development/python-modules/blosc2/default.nix
View File

@ -4,7 +4,7 @@
# build-system
, cmake
, cython_3
, cython
, ninja
, oldest-supported-numpy
, pkg-config
@ -47,7 +47,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
cmake
cython_3
cython
ninja
oldest-supported-numpy
pkg-config

4
pkgs/development/python-modules/bluetooth-data-tools/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchFromGitHub
, cryptography
, cython_3
, cython
, poetry-core
, pytestCheckHook
, pythonOlder
@ -28,7 +28,7 @@ buildPythonPackage rec {
env.REQUIRE_CYTHON = 1;
nativeBuildInputs = [
cython_3
cython
poetry-core
setuptools
];

4
pkgs/development/python-modules/cached-ipaddress/default.nix
View File

@ -1,6 +1,6 @@
{ lib
, buildPythonPackage
, cython_3
, cython
, fetchFromGitHub
, poetry-core
, pytestCheckHook
@ -30,7 +30,7 @@ buildPythonPackage rec {
'';
nativeBuildInputs = [
cython_3
cython
poetry-core
setuptools
wheel

4
pkgs/development/python-modules/cassandra-driver/default.nix
View File

@ -2,7 +2,7 @@
, stdenv
, buildPythonPackage
, cryptography
, cython
, cython_0
, eventlet
, fetchFromGitHub
, geomet
@ -43,7 +43,7 @@ buildPythonPackage rec {
'';
nativeBuildInputs = [
cython
cython_0
];
buildInputs = [

4
pkgs/development/python-modules/certifi/default.nix
View File

@ -9,7 +9,7 @@
buildPythonPackage rec {
pname = "certifi";
version = "2023.11.17";
version = "2024.02.02";
pyproject = true;
disabled = pythonOlder "3.6";
@ -18,7 +18,7 @@ buildPythonPackage rec {
owner = pname;
repo = "python-certifi";
rev = version;
hash = "sha256-H3zsFJjWt2+tT7yqQOOZZwSL5y0AtfDz6Fqxwpm4Wl8=";
hash = "sha256-gnWJjZy5E/0lvAeLftXNtcHH6RHL/dUomXOBgumiWX8=";
};
patches = [

25
pkgs/development/python-modules/certifi/env.patch
View File

@ -1,13 +1,17 @@
diff --git a/certifi/core.py b/certifi/core.py
index de02898..c033d20 100644
index 91f538b..1110ce0 100644
--- a/certifi/core.py
+++ b/certifi/core.py
@@ -4,15 +4,25 @@ certifi.py
@@ -4,6 +4,7 @@ certifi.py
This module returns the installation location of cacert.pem or its contents.
"""
+import os
import sys
import atexit
@@ -11,12 +12,21 @@ def exit_cacert_ctx() -> None:
_CACERT_CTX.__exit__(None, None, None) # type: ignore[union-attr]
+def get_cacert_path_from_environ():
@ -29,17 +33,16 @@ index de02898..c033d20 100644
def where() -> str:
# This is slightly terrible, but we want to delay extracting the file
@@ -39,14 +49,16 @@ if sys.version_info >= (3, 11):
@@ -44,6 +54,8 @@ if sys.version_info >= (3, 11):
return _CACERT_PATH
def contents() -> str:
- return files("certifi").joinpath("cacert.pem").read_text(encoding="ascii")
+ if _CACERT_PATH is not None:
+ return open(_CACERT_PATH, encoding="utf-8").read()
+ return files("certifi").joinpath("cacert.pem").read_text(encoding="utf-8")
return files("certifi").joinpath("cacert.pem").read_text(encoding="ascii")
elif sys.version_info >= (3, 7):
@@ -51,7 +63,7 @@ elif sys.version_info >= (3, 7):
from importlib.resources import path as get_path, read_text
_CACERT_CTX = None
@ -48,7 +51,7 @@ index de02898..c033d20 100644
def where() -> str:
# This is slightly terrible, but we want to delay extracting the
@@ -74,7 +86,9 @@ elif sys.version_info >= (3, 7):
@@ -80,7 +92,9 @@ elif sys.version_info >= (3, 7):
return _CACERT_PATH
def contents() -> str:
@ -59,7 +62,7 @@ index de02898..c033d20 100644
else:
import os
@@ -84,6 +98,8 @@ else:
@@ -90,6 +104,8 @@ else:
Package = Union[types.ModuleType, str]
Resource = Union[str, "os.PathLike"]
@ -68,7 +71,7 @@ index de02898..c033d20 100644
# This fallback will work for Python versions prior to 3.7 that lack the
# importlib.resources module but relies on the existing `where` function
# so won't address issues with environments like PyOxidizer that don't set
@@ -102,7 +118,14 @@ else:
@@ -108,7 +124,13 @@ else:
def where() -> str:
f = os.path.dirname(__file__)
@ -78,9 +81,7 @@ index de02898..c033d20 100644
return os.path.join(f, "cacert.pem")
def contents() -> str:
- return read_text("certifi", "cacert.pem", encoding="ascii")
+ if _CACERT_PATH is not None:
+ with open(_CACERT_PATH, encoding="utf-8") as data:
+ return data.read()
+
+ return read_text("certifi", "cacert.pem", encoding="utf-8")
return read_text("certifi", "cacert.pem", encoding="ascii")

4
pkgs/development/python-modules/chacha20poly1305-reuseable/default.nix
View File

@ -4,7 +4,7 @@
, pythonOlder
# build-system
, cython_3
, cython
, poetry-core
, setuptools
@ -34,7 +34,7 @@ buildPythonPackage {
};
nativeBuildInputs = [
cython_3
cython
poetry-core
setuptools
];

8
pkgs/development/python-modules/chalice/default.nix
View File

@ -10,7 +10,7 @@
, mock
, mypy-extensions
, pip
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, pyyaml
, requests
@ -61,15 +61,11 @@ buildPythonPackage rec {
nativeCheckInputs = [
hypothesis
mock
pytestCheckHook
pytest7CheckHook
requests
websocket-client
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTestPaths = [
# Don't check the templates and the sample app
"chalice/templates"

2
pkgs/development/python-modules/chart-studio/default.nix
View File

@ -21,7 +21,7 @@ buildPythonPackage rec {
owner = "plotly";
repo = "plotly.py";
rev = "refs/tags/v${version}";
hash = "sha256-LSZGaefxQC6h9VAJ2wgZyaQPR6vs0wrp2oxd51I3pL8=";
hash = "sha256-i//LKTNmoIrusBnpfSGc9cDijPxg/dY/7fumV3kfTAY=";
};
sourceRoot = "${src.name}/packages/python/chart-studio";

13
pkgs/development/python-modules/chex/default.nix
View File

@ -2,6 +2,7 @@
, buildPythonPackage
, pythonOlder
, fetchFromGitHub
, setuptools
, absl-py
, cloudpickle
, dm-tree
@ -15,8 +16,8 @@
buildPythonPackage rec {
pname = "chex";
version = "0.1.85";
format = "setuptools";
version = "0.1.86";
pyproject = true;
disabled = pythonOlder "3.9";
@ -24,10 +25,14 @@ buildPythonPackage rec {
owner = "deepmind";
repo = "chex";
rev = "refs/tags/v${version}";
hash = "sha256-7k/+2dNNbPBXtbabuOEVpAI7T1SuM4JDf074dmTg/vs=";
hash = "sha256-Z5Ns4fG5pC99I4xdGjDMKX6YZpTtd1y0TWcIOtr7dug=";
};
propagatedBuildInputs = [
build-system = [
setuptools
];
dependencies = [
absl-py
jaxlib
jax

4
pkgs/development/python-modules/clickhouse-cityhash/default.nix
View File

@ -1,6 +1,6 @@
{ lib
, buildPythonPackage
, cython_3
, cython
, fetchPypi
, pythonOlder
, setuptools
@ -19,7 +19,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
setuptools
];

4
pkgs/development/python-modules/clickhouse-connect/default.nix
View File

@ -4,7 +4,7 @@
, pythonOlder
, pytestCheckHook
# build_requires
, cython_3
, cython
# install_requires
, certifi
, importlib-metadata
@ -36,7 +36,7 @@ buildPythonPackage rec {
hash = "sha256-YEtcM9+GO8mYv2pyaBYmXdmWLXVuteKtQIJR4H+Xsd4=";
};
nativeBuildInputs = [ cython_3 ];
nativeBuildInputs = [ cython ];
setupPyBuildFlags = [ "--inplace" ];
enableParallelBuilding = true;

4
pkgs/development/python-modules/clickhouse-driver/default.nix
View File

@ -1,7 +1,7 @@
{ lib
, buildPythonPackage
, clickhouse-cityhash
, cython_3
, cython
, fetchFromGitHub
, freezegun
, lz4
@ -29,7 +29,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
setuptools
];

5
pkgs/development/python-modules/cloudpathlib/default.nix
View File

@ -11,8 +11,7 @@
, boto3
, psutil
, pydantic
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, pytest-cases
, pytest-cov
, pytest-xdist
@ -66,7 +65,7 @@ buildPythonPackage rec {
google-cloud-storage
psutil
pydantic
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
pytest-cases
pytest-cov
pytest-xdist

11
pkgs/development/python-modules/colorcet/default.nix
View File

@ -1,6 +1,8 @@
{ lib
, buildPythonPackage
, fetchPypi
, setuptools
, setuptools-scm
, param
, pyct
, pytest-mpl
@ -10,14 +12,19 @@
buildPythonPackage rec {
pname = "colorcet";
version = "3.1.0";
format = "setuptools";
pyproject = true;
src = fetchPypi {
inherit pname version;
hash = "sha256-KSGzzYGiKIqvLWPbwM48JtzYgujDicxQXWiGv3qppOs=";
};
propagatedBuildInputs = [
build-system = [
setuptools
setuptools-scm
];
dependencies = [
param
pyct
];

4
pkgs/development/python-modules/cpyparsing/default.nix
View File

@ -1,7 +1,7 @@
{ lib
, buildPythonPackage
, fetchFromGitHub
, cython_3
, cython
, pexpect
, python
, pythonOlder
@ -23,7 +23,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
setuptools
];

11
pkgs/development/python-modules/cssutils/default.nix
View File

@ -1,8 +1,6 @@
{ lib
, buildPythonPackage
, pythonAtLeast
, pythonOlder
, fetchpatch
, fetchPypi
, setuptools
, setuptools-scm
@ -10,7 +8,7 @@
, jaraco-test
, lxml
, mock
, pytestCheckHook
, pytest7CheckHook
, importlib-resources
}:
@ -37,16 +35,11 @@ buildPythonPackage rec {
jaraco-test
lxml
mock
pytestCheckHook
pytest7CheckHook
] ++ lib.optionals (pythonOlder "3.9") [
importlib-resources
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = [
# access network
"test_parseUrl"

4
pkgs/development/python-modules/cypari2/default.nix
View File

@ -5,7 +5,7 @@
, fetchPypi
, pari
, gmp
, cython_3
, cython
, cysignals
}:
@ -45,7 +45,7 @@ buildPythonPackage rec {
propagatedBuildInputs = [
cysignals
cython_3
cython
];
checkPhase = ''

4
pkgs/development/python-modules/cysignals/default.nix
View File

@ -2,7 +2,7 @@
, autoreconfHook
, fetchPypi
, buildPythonPackage
, cython_3
, cython
, pariSupport ? true, pari # for interfacing with the PARI/GP signal handler
}:
@ -34,7 +34,7 @@ buildPythonPackage rec {
'';
propagatedBuildInputs = [
cython_3
cython
] ++ lib.optionals pariSupport [
# When cysignals is built with pari, including cysignals into the
# buildInputs of another python package will cause cython to link against

91
pkgs/development/python-modules/cython/0.nix Normal file
View File

@ -0,0 +1,91 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, fetchpatch
, setuptools
, python
, pkg-config
, gdb
, numpy
, ncurses
}:
let
excludedTests = [ "reimport_from_subinterpreter" ]
# cython's testsuite is not working very well with libc++
# We are however optimistic about things outside of testsuite still working
++ lib.optionals (stdenv.cc.isClang or false) [ "cpdef_extern_func" "libcpp_algo" ]
# Some tests in the test suite isn't working on aarch64. Disable them for
# now until upstream finds a workaround.
# Upstream issue here: https://github.com/cython/cython/issues/2308
++ lib.optionals stdenv.isAarch64 [ "numpy_memoryview" ]
++ lib.optionals stdenv.isi686 [ "future_division" "overflow_check_longlong" ]
;
in buildPythonPackage rec {
pname = "cython";
version = "0.29.36";
pyproject = true;
src = fetchPypi {
pname = "Cython";
inherit version;
hash = "sha256-QcDP0tdU44PJ7rle/8mqSrhH0Ml0cHfd18Dctow7wB8=";
};
nativeBuildInputs = [
pkg-config
setuptools
];
nativeCheckInputs = [
gdb numpy ncurses
];
LC_ALL = "en_US.UTF-8";
patches = [
# backport Cython 3.0 trashcan support (https://github.com/cython/cython/pull/2842) to 0.X series.
# it does not affect Python code unless the code explicitly uses the feature.
# trashcan support is needed to avoid stack overflows during object deallocation in sage (https://trac.sagemath.org/ticket/27267)
./trashcan.patch
# The above commit introduces custom trashcan macros, as well as
# compiler changes to use them in Cython-emitted code. The latter
# change is still useful, but the former has been upstreamed as of
# Python 3.8, and the patch below makes Cython use the upstream
# trashcan macros whenever available. This is needed for Python
# 3.11 support, because the API used in Cython's implementation
# changed: https://github.com/cython/cython/pull/4475
(fetchpatch {
name = "disable-trashcan.patch";
url = "https://github.com/cython/cython/commit/e337825cdcf5e94d38ba06a0cb0188e99ce0cc92.patch";
hash = "sha256-q0f63eetKrDpmP5Z4v8EuGxg26heSyp/62OYqhRoSso=";
})
];
checkPhase = ''
export HOME="$NIX_BUILD_TOP"
${python.interpreter} runtests.py -j$NIX_BUILD_CORES \
--no-code-style \
${lib.optionalString (builtins.length excludedTests != 0)
''--exclude="(${builtins.concatStringsSep "|" excludedTests})"''}
'';
# https://github.com/cython/cython/issues/2785
# Temporary solution
doCheck = false;
# doCheck = !stdenv.isDarwin;
# force regeneration of generated code in source distributions
# https://github.com/cython/cython/issues/5089
setupHook = ./setup-hook.sh;
meta = {
changelog = "https://github.com/cython/cython/blob/${version}/CHANGES.rst";
description = "An optimising static compiler for both the Python programming language and the extended Cython programming language";
homepage = "https://cython.org";
license = lib.licenses.asl20;
maintainers = with lib.maintainers; [ fridh ];
};
}

28
pkgs/development/python-modules/cython/default.nix
View File

@ -2,7 +2,6 @@
, stdenv
, buildPythonPackage
, fetchPypi
, fetchpatch
, setuptools
, python
, pkg-config
@ -25,16 +24,16 @@ let
in buildPythonPackage rec {
pname = "cython";
version = "0.29.36";
version = "3.0.9";
pyproject = true;
src = fetchPypi {
pname = "Cython";
inherit version;
hash = "sha256-QcDP0tdU44PJ7rle/8mqSrhH0Ml0cHfd18Dctow7wB8=";
hash = "sha256-otNU8FnR8FXTTPqmLFtovHisLOq2QHFI1H+1CM87pPM=";
};
nativeBuildInputs = [
build-system = [
pkg-config
setuptools
];
@ -43,26 +42,7 @@ in buildPythonPackage rec {
gdb numpy ncurses
];
LC_ALL = "en_US.UTF-8";
patches = [
# backport Cython 3.0 trashcan support (https://github.com/cython/cython/pull/2842) to 0.X series.
# it does not affect Python code unless the code explicitly uses the feature.
# trashcan support is needed to avoid stack overflows during object deallocation in sage (https://trac.sagemath.org/ticket/27267)
./trashcan.patch
# The above commit introduces custom trashcan macros, as well as
# compiler changes to use them in Cython-emitted code. The latter
# change is still useful, but the former has been upstreamed as of
# Python 3.8, and the patch below makes Cython use the upstream
# trashcan macros whenever available. This is needed for Python
# 3.11 support, because the API used in Cython's implementation
# changed: https://github.com/cython/cython/pull/4475
(fetchpatch {
name = "disable-trashcan.patch";
url = "https://github.com/cython/cython/commit/e337825cdcf5e94d38ba06a0cb0188e99ce0cc92.patch";
hash = "sha256-q0f63eetKrDpmP5Z4v8EuGxg26heSyp/62OYqhRoSso=";
})
];
env.LC_ALL = "en_US.UTF-8";
checkPhase = ''
export HOME="$NIX_BUILD_TOP"

5
pkgs/development/python-modules/daqp/default.nix
View File

@ -1,9 +1,8 @@
{ lib
, stdenv
, fetchFromGitHub
, buildPythonPackage
, unittestCheckHook
, cython
, cython_0
, setuptools
, wheel
, numpy
@ -32,7 +31,7 @@ buildPythonPackage rec {
unittestFlagsArray = [ "-s" "test" "-p" "'*.py'" "-v" ];
nativeBuildInputs = [
cython
cython_0
setuptools
wheel
];

6
pkgs/development/python-modules/dask/default.nix
View File

@ -38,7 +38,7 @@
buildPythonPackage rec {
pname = "dask";
version = "2024.1.1";
version = "2024.2.1";
pyproject = true;
disabled = pythonOlder "3.9";
@ -47,7 +47,7 @@ buildPythonPackage rec {
owner = "dask";
repo = "dask";
rev = "refs/tags/${version}";
hash = "sha256-L8bRh2bx36CYrAFXYJF67rCeCRfm5ufhTkMFRJo0yYo=";
hash = "sha256-8VFtKPaF0PqCjqFB+plFe1GjUno5j7j86+wxKhzByyw=";
};
nativeBuildInputs = [
@ -127,8 +127,6 @@ buildPythonPackage rec {
"--reruns 3"
# Don't run tests that require network access
"-m 'not network'"
# pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = lib.optionals stdenv.isDarwin [

1
pkgs/development/python-modules/dbt-core/default.nix
View File

@ -58,6 +58,7 @@ buildPythonPackage rec {
"mashumaro"
"networkx"
"logbook"
"pathspec"
"urllib3"
];

4
pkgs/development/python-modules/dbus-fast/default.nix
View File

@ -1,7 +1,7 @@
{ lib
, async-timeout
, buildPythonPackage
, cython_3
, cython
, fetchFromGitHub
, poetry-core
, pytest-asyncio
@ -30,7 +30,7 @@ buildPythonPackage rec {
env.REQUIRE_CYTHON = 1;
nativeBuildInputs = [
cython_3
cython
poetry-core
setuptools
wheel

8
pkgs/development/python-modules/deal/default.nix
View File

@ -19,7 +19,7 @@
buildPythonPackage rec {
pname = "deal";
version = "4.24.3";
version = "4.24.4";
format = "pyproject";
disabled = pythonOlder "3.7";
@ -27,7 +27,7 @@ buildPythonPackage rec {
owner = "life4";
repo = pname;
rev = "refs/tags/${version}";
hash = "sha256-QlM3d/jmg6v3L3D45+cgcCej71U1dl4uZ6sAYGGm3tU=";
hash = "sha256-4orpoYfPGSvquhg9w63uUe8QbBa2RUpxaEJ9uy28+fU=";
};
postPatch = ''
@ -62,10 +62,6 @@ buildPythonPackage rec {
flake8
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = [
# needs internet access
"test_smoke_has"

9
pkgs/development/python-modules/demes/default.nix
View File

@ -5,7 +5,7 @@
, ruamel-yaml
, attrs
, pythonOlder
, pytestCheckHook
, pytest7CheckHook
, pytest-xdist
, numpy
}:
@ -36,16 +36,11 @@ buildPythonPackage rec {
'';
nativeCheckInputs = [
pytestCheckHook
pytest7CheckHook
pytest-xdist
numpy
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTestPaths = [
"tests/test_spec.py"
];

9
pkgs/development/python-modules/detect-secrets/default.nix
View File

@ -5,7 +5,7 @@
, mock
, pkgs
, pyahocorasick
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, pyyaml
, requests
@ -37,17 +37,12 @@ buildPythonPackage rec {
nativeCheckInputs = [
mock
pytestCheckHook
pytest7CheckHook
responses
unidiff
pkgs.gitMinimal
];
pytestFlagsArray = [
# Pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
preCheck = ''
export HOME=$(mktemp -d);
'';

5
pkgs/development/python-modules/devtools/default.nix
View File

@ -39,11 +39,6 @@ buildPythonPackage rec {
pytest-mock
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
"-W ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = [
# Test for Windows32
"test_print_subprocess"

9
pkgs/development/python-modules/diffsync/default.nix
View File

@ -27,6 +27,11 @@ buildPythonPackage rec {
pythonRelaxDepsHook
];
pythonRelaxDeps = [
"packaging"
"structlog"
];
propagatedBuildInputs = [
colorama
packaging
@ -35,10 +40,6 @@ buildPythonPackage rec {
structlog
];
pythonRelaxDeps = [
"structlog"
];
pythonImportsCheck = [
"diffsync"
];

13
pkgs/development/python-modules/django-filter/default.nix
View File

@ -6,22 +6,22 @@
, djangorestframework
, pytestCheckHook
, pytest-django
, python
, pytz
}:
buildPythonPackage rec {
pname = "django-filter";
version = "23.5";
format = "pyproject";
version = "24.1";
pyproject = true;
src = fetchPypi {
inherit pname version;
hash = "sha256-Z1g6pDuR/oxJ90qDLZX02EQr5ij9TG1l6fgR9RU6Tlw=";
hash = "sha256-ZctDzicgd+Wsaq4QVNdsEhzWtVLilqgqE5Iek3G6+ME=";
};
nativeBuildInputs = [ flit-core ];
build-system = [ flit-core ];
propagatedBuildInputs = [ django ];
dependencies = [ django ];
pythonImportsCheck = [
"django_filters"
@ -31,6 +31,7 @@ buildPythonPackage rec {
djangorestframework
pytestCheckHook
pytest-django
pytz
];
env.DJANGO_SETTINGS_MODULE = "tests.settings";

9
pkgs/development/python-modules/djangorestframework/default.nix
View File

@ -6,7 +6,7 @@
, django-guardian
, pythonOlder
, pytest-django
, pytestCheckHook
, pytest7CheckHook
, pytz
, pyyaml
, uritemplate
@ -32,7 +32,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
pytest-django
pytestCheckHook
pytest7CheckHook
# optional tests
coreapi
@ -41,11 +41,6 @@ buildPythonPackage rec {
uritemplate
];
pytestFlagsArray = [
# ytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
pythonImportsCheck = [ "rest_framework" ];
meta = with lib; {

4
pkgs/development/python-modules/dtlssocket/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchPypi
, autoconf
, cython
, cython_0
, setuptools
}:
@ -20,7 +20,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
autoconf
cython
cython_0
setuptools
];

5
pkgs/development/python-modules/ed25519/default.nix
View File

@ -1,10 +1,13 @@
{ lib, fetchPypi, buildPythonPackage }:
{ lib, fetchPypi, buildPythonPackage, pythonAtLeast }:
buildPythonPackage rec {
pname = "ed25519";
version = "1.5";
format = "setuptools";
# last commit in 2019, various compat issues with 3.12
disabled = pythonAtLeast "3.12";
src = fetchPypi {
inherit pname version;
sha256 = "0n1k83ww0pr4q6z0h7p8hvy21hcgb96jvgllfbwhvvyf37h3w182";

4
pkgs/development/python-modules/editdistance/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchFromGitHub
, pytestCheckHook
, cython_3
, cython
, pdm-backend
, setuptools
, pythonOlder
@ -23,7 +23,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
pdm-backend
setuptools
];

4
pkgs/development/python-modules/editdistpy/default.nix
View File

@ -7,7 +7,7 @@
, pythonOlder
, setuptools
, cython_3
, cython
, symspellpy
, numpy
@ -30,7 +30,7 @@ buildPythonPackage rec {
build-system = [
setuptools
cython_3
cython
];
# error: infinite recursion encountered

9
pkgs/development/python-modules/falcon/default.nix
View File

@ -6,7 +6,7 @@
, fetchFromGitHub
# build
, cython_3
, cython
, setuptools
# tests
@ -17,8 +17,7 @@
, mujson
, orjson
, pytest-asyncio
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, pyyaml
, rapidjson
, requests
@ -44,7 +43,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
setuptools
] ++ lib.optionals (!isPyPy) [
cython_3
cython
];
__darwinAllowLocalNetworking = true;
@ -61,7 +60,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
# https://github.com/falconry/falcon/blob/master/requirements/tests
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
pyyaml
requests
rapidjson

17
pkgs/development/python-modules/fastjsonschema/default.nix
View File

@ -2,13 +2,14 @@
, stdenv
, buildPythonPackage
, fetchFromGitHub
, fetchpatch2
, pytestCheckHook
, pythonOlder
}:
buildPythonPackage rec {
pname = "fastjsonschema";
version = "2.18.1";
version = "2.19.1";
format = "setuptools";
disabled = pythonOlder "3.7";
@ -18,17 +19,21 @@ buildPythonPackage rec {
repo = "python-fastjsonschema";
rev = "v${version}";
fetchSubmodules = true;
hash = "sha256-t6JnqQgsWAL8oL8+LO0xrXMYsZOlTF3DlXkRiqUzYtU=";
hash = "sha256-UxcxVB4ldnGAYJKWEccivon1CwZD588mNiVJOJPNeN8=";
};
patches = [
(fetchpatch2 {
name = "fastjsonschema-pytest8-compat.patch";
url = "https://github.com/horejsek/python-fastjsonschema/commit/efc04daf4124a598182dfcfd497615cd1e633d18.patch";
hash = "sha256-G1/PIpdN+KFfRP9pUFf/ANXLq3mzrocEHyBNWQMVOZM=";
})
];
nativeCheckInputs = [
pytestCheckHook
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
dontUseSetuptoolsCheck = true;
disabledTests = [

8
pkgs/development/python-modules/favicon/default.nix
View File

@ -2,7 +2,7 @@
, beautifulsoup4
, buildPythonPackage
, fetchPypi
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, requests
, requests-mock
@ -30,14 +30,10 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
pytest7CheckHook
requests-mock
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
pythonImportsCheck = [
"favicon"
];

4
pkgs/development/python-modules/fiona/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, pythonOlder
, fetchFromGitHub
, cython_3
, cython
, gdal
, oldest-supported-numpy
, setuptools
@ -34,7 +34,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
gdal # for gdal-config
oldest-supported-numpy
setuptools

12
pkgs/development/python-modules/flaky/default.nix
View File

@ -1,20 +1,25 @@
{ lib
, buildPythonPackage
, fetchPypi
, setuptools
, mock
, pytest
}:
buildPythonPackage rec {
pname = "flaky";
version = "3.7.0";
format = "setuptools";
version = "3.8.1";
pyproject = true;
src = fetchPypi {
inherit pname version;
hash = "sha256-OtEAeAchoZEfV6FlgJt+omWnhjMFrLZnCCIIIMr4qg0=";
hash = "sha256-RyBKgeyQXz1az71h2uq8raj51AMWFtm8sGGEYXKWmfU=";
};
build-system = [
setuptools
];
nativeCheckInputs = [
mock
pytest
@ -29,6 +34,7 @@ buildPythonPackage rec {
'';
meta = with lib; {
changelog = "https://github.com/box/flaky/blob/v${version}/HISTORY.rst";
homepage = "https://github.com/box/flaky";
description = "Plugin for nose or py.test that automatically reruns flaky tests";
license = licenses.asl20;

3
pkgs/development/python-modules/flet/default.nix
View File

@ -36,9 +36,10 @@ buildPythonPackage rec {
];
pythonRelaxDeps = [
"websockets"
"cookiecutter"
"packaging"
"watchdog"
"websockets"
];
propagatedBuildInputs = [

15
pkgs/development/python-modules/flexmock/default.nix
View File

@ -3,32 +3,33 @@
, fetchPypi
, pytestCheckHook
, pythonOlder
, poetry-core
, teamcity-messages
, testtools
}:
buildPythonPackage rec {
pname = "flexmock";
version = "0.11.3";
format = "setuptools";
version = "0.12.0";
pyproject = true;
disabled = pythonOlder "3.6";
src = fetchPypi {
inherit pname version;
hash = "sha256-sf419qXzJUe1zTGhXAYNmrhj3Aiv8BjNc9x40bZR7dQ=";
hash = "sha256-YdBvPRRCuBW3qoWh9HvoONBW9fXRTO/teuv7A0c9FKs=";
};
build-system = [
poetry-core
];
nativeCheckInputs = [
pytestCheckHook
teamcity-messages
testtools
];
disabledTests = [
"test_failed_test_case"
];
pythonImportsCheck = [
"flexmock"
];

5
pkgs/development/python-modules/flow-record/default.nix
View File

@ -5,8 +5,7 @@
, fetchFromGitHub
, lz4
, msgpack
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, pythonOlder
, setuptools
, setuptools-scm
@ -52,7 +51,7 @@ buildPythonPackage rec {
};
nativeCheckInputs = [
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
pythonImportsCheck = [

5
pkgs/development/python-modules/fonttools/default.nix
View File

@ -21,8 +21,7 @@
, xattr
, skia-pathops
, uharfbuzz
, pytestCheckHook
, pytest_7
, pytest7CheckHook
}:
buildPythonPackage rec {
@ -65,7 +64,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
# test suite fails with pytest>=8.0.1
# https://github.com/fonttools/fonttools/issues/3458
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
] ++ lib.concatLists (lib.attrVals ([
"woff"
# "interpolatable" is not included because it only contains 2 tests at the time of writing but adds 270 extra dependencies

4
pkgs/development/python-modules/fpylll/default.nix
View File

@ -5,7 +5,7 @@
# build-system
, cysignals
, cython_3
, cython
, pkgconfig
, setuptools
@ -43,7 +43,7 @@ buildPythonPackage rec {
];
nativeBuildInputs = [
cython_3
cython
cysignals
pkgconfig
setuptools

4
pkgs/development/python-modules/frozenlist/default.nix
View File

@ -1,6 +1,6 @@
{ lib
, buildPythonPackage
, cython_3
, cython
, expandvars
, fetchFromGitHub
, pep517
@ -30,7 +30,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
expandvars
cython_3
cython
pep517
setuptools
wheel

4
pkgs/development/python-modules/fugashi/default.nix
View File

@ -3,7 +3,7 @@
, pythonOlder
, pytestCheckHook
, buildPythonPackage
, cython
, cython_0
, mecab
, setuptools-scm
, ipadic
@ -24,7 +24,7 @@ buildPythonPackage rec {
hash = "sha256-4i7Q+TtXTQNSJ1EIcS8KHrVPdCJAgZh86Y6lB8772XU=";
};
nativeBuildInputs = [ cython mecab setuptools-scm ];
nativeBuildInputs = [ cython_0 mecab setuptools-scm ];
nativeCheckInputs = [ ipadic pytestCheckHook ]
++ passthru.optional-dependencies.unidic-lite;

4
pkgs/development/python-modules/gbinder-python/default.nix
View File

@ -1,7 +1,7 @@
{ lib
, fetchFromGitHub
, buildPythonPackage
, cython
, cython_0
, pkg-config
, libgbinder
}:
@ -23,7 +23,7 @@ buildPythonPackage rec {
];
nativeBuildInputs = [
cython
cython_0
pkg-config
];

4
pkgs/development/python-modules/gevent/default.nix
View File

@ -5,7 +5,7 @@
, python
, libev
, cffi
, cython_3
, cython
, greenlet
, importlib-metadata
, setuptools
@ -34,7 +34,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
setuptools
wheel
] ++ lib.optionals (!isPyPy) [

22
pkgs/development/python-modules/graphene-django/default.nix
View File

@ -1,7 +1,6 @@
{ stdenv
, lib
, buildPythonPackage
, pythonAtLeast
, pythonOlder
, fetchFromGitHub
@ -17,7 +16,7 @@
, py
, pytest-django
, pytest-random-order
, pytestCheckHook
, pytest7CheckHook
}:
buildPythonPackage rec {
@ -58,20 +57,15 @@ buildPythonPackage rec {
py
pytest-django
pytest-random-order
pytestCheckHook
pytest7CheckHook
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = lib.optionals (pythonAtLeast "3.11") [
# Python 3.11 support, https://github.com/graphql-python/graphene-django/pull/1365
"test_django_objecttype_convert_choices_enum_naming_collisions"
"test_django_objecttype_choices_custom_enum_name"
"test_django_objecttype_convert_choices_enum_list"
"test_schema_representation"
disabledTests = [
# https://github.com/graphql-python/graphene-django/issues/1510
"test_should_filepath_convert_string"
"test_should_choice_convert_enum"
"test_should_multiplechoicefield_convert_to_list_of_enum"
"test_perform_mutate_success_with_enum_choice_field"
] ++ lib.optionals stdenv.isDarwin [
# this test touches files in the "/" directory and fails in darwin sandbox
"test_should_filepath_convert_string"

5
pkgs/development/python-modules/graphene/default.nix
View File

@ -8,7 +8,7 @@
, pytest-asyncio
, pytest-benchmark
, pytest-mock
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, pytz
, snapshottest
@ -39,7 +39,7 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
pytest7CheckHook
pytest-asyncio
pytest-benchmark
pytest-mock
@ -49,7 +49,6 @@ buildPythonPackage rec {
pytestFlagsArray = [
"--benchmark-disable"
"-W ignore::pytest.PytestRemovedIn8Warning"
];
pythonImportsCheck = [

4
pkgs/development/python-modules/h5py/default.nix
View File

@ -7,7 +7,7 @@
, wheel
, numpy
, hdf5
, cython
, cython_0
, pkgconfig
, mpi4py ? null
, openssh
@ -50,7 +50,7 @@ in buildPythonPackage rec {
preBuild = lib.optionalString mpiSupport "export CC=${lib.getDev mpi}/bin/mpicc";
nativeBuildInputs = [
cython
cython_0
oldest-supported-numpy
pkgconfig
setuptools

4
pkgs/development/python-modules/hatchling/default.nix
View File

@ -20,13 +20,13 @@
buildPythonPackage rec {
pname = "hatchling";
version = "1.21.1";
version = "1.22.4";
format = "pyproject";
disabled = pythonOlder "3.8";
src = fetchPypi {
inherit pname version;
hash = "sha256-u6RARToiTn1EeEV/oujYw2M3Zbr6Apdaa1O5v5F5gLw=";
hash = "sha256-ii3OyW1/uEg4LvWEjlrEP9rmQfNaCKP6tRFr1JXzQW4=";
};
# listed in backend/pyproject.toml

8
pkgs/development/python-modules/hid-parser/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchPypi
, setuptools
, pytestCheckHook
, pytest7CheckHook
, hypothesis
}:
@ -21,14 +21,10 @@ buildPythonPackage rec {
];
nativeCheckInputs = [
pytestCheckHook
pytest7CheckHook
hypothesis
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
pythonImportsCheck = [ "hid_parser" ];
meta = with lib; {

8
pkgs/development/python-modules/hidapi/default.nix
View File

@ -3,7 +3,7 @@
, buildPythonPackage
, fetchPypi
, xcbuild
, cython
, cython_0
, libusb1
, udev
, darwin
@ -19,10 +19,10 @@ buildPythonPackage rec {
sha256 = "a7cb029286ced5426a381286526d9501846409701a29c2538615c3d1a612b8be";
};
nativeBuildInputs = lib.optionals stdenv.isDarwin [ xcbuild ];
nativeBuildInputs = [ cython_0 ]
++ lib.optionals stdenv.isDarwin [ xcbuild ];
propagatedBuildInputs = [ cython ]
++ lib.optionals stdenv.isLinux [ libusb1 udev ]
propagatedBuildInputs = lib.optionals stdenv.isLinux [ libusb1 udev ]
++ lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ AppKit CoreFoundation IOKit ]);
# Fix the USB backend library lookup

5
pkgs/development/python-modules/homematicip/default.nix
View File

@ -5,8 +5,7 @@
, async-timeout
, buildPythonPackage
, fetchFromGitHub
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, pythonAtLeast
, pythonOlder
, pytest-aiohttp
@ -50,7 +49,7 @@ buildPythonPackage rec {
aiohttp-wsgi
pytest-aiohttp
pytest-asyncio
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
];
pytestFlagsArray = [

4
pkgs/development/python-modules/hypothesis/default.nix
View File

@ -22,7 +22,7 @@
buildPythonPackage rec {
pname = "hypothesis";
version = "6.98.17";
version = "6.99.12";
pyproject = true;
disabled = pythonOlder "3.7";
@ -31,7 +31,7 @@ buildPythonPackage rec {
owner = "HypothesisWorks";
repo = "hypothesis";
rev = "hypothesis-python-${version}";
hash = "sha256-2knFmaa334vFo8bbLCmrWAXRDXFcC+GPRqj7RG3FqEQ=";
hash = "sha256-0nzjRDv4L3bxxnC0lBY5S7FP9CFhyzHzNchWXoX91Zg=";
};
# I tried to package sphinx-selective-exclude, but it throws

4
pkgs/development/python-modules/in-n-out/default.nix
View File

@ -1,6 +1,6 @@
{ lib
, buildPythonPackage
, cython_3
, cython
, fetchPypi
, future
, pytestCheckHook
@ -25,7 +25,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
hatchling
hatch-vcs
];

5
pkgs/development/python-modules/ipython/default.nix
View File

@ -22,8 +22,7 @@
# Test dependencies
, pickleshare
, pytest-asyncio
, pytestCheckHook
, pytest_7
, pytest7CheckHook
, testpath
}:
@ -72,7 +71,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
pickleshare
pytest-asyncio
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
testpath
];

9
pkgs/development/python-modules/ipywidgets/default.nix
View File

@ -8,7 +8,7 @@
, jsonschema
, jupyterlab-widgets
, lib
, pytestCheckHook
, pytest7CheckHook
, pytz
, traitlets
, widgetsnbextension
@ -40,15 +40,10 @@ buildPythonPackage rec {
nativeCheckInputs = [
ipykernel
jsonschema
pytestCheckHook
pytest7CheckHook
pytz
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
meta = {
description = "IPython HTML widgets for Jupyter";
homepage = "https://github.com/jupyter-widgets/ipywidgets";

4
pkgs/development/python-modules/isort/default.nix
View File

@ -52,8 +52,6 @@ buildPythonPackage rec {
"--ignore=tests/benchmark/" # requires pytest-benchmark
"--ignore=tests/integration/" # pulls in 10 other packages
"--ignore=tests/unit/profiles/test_black.py" # causes infinite recursion to include black
# pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
disabledTests = [
@ -74,6 +72,8 @@ buildPythonPackage rec {
"test_value_assignment_list"
# profiles not available
"test_isort_supports_shared_profiles_issue_970"
# https://github.com/PyCQA/isort/issues/2234
"test_isort_should_warn_on_empty_custom_config_issue_1433"
];
meta = with lib; {

8
pkgs/development/python-modules/json-tricks/default.nix
View File

@ -2,7 +2,7 @@
, fetchFromGitHub
, buildPythonPackage
, pythonOlder
, pytestCheckHook
, pytest7CheckHook
, numpy
, pandas
, pytz
@ -26,11 +26,7 @@ buildPythonPackage rec {
numpy
pandas
pytz
pytestCheckHook
];
pytestFlagsArray = [
"-W" "ignore::pytest.PytestRemovedIn8Warning"
pytest7CheckHook
];
pythonImportsCheck = [

4
pkgs/development/python-modules/kivy/default.nix
View File

@ -1,6 +1,6 @@
{ lib, stdenv
, buildPythonPackage, fetchFromGitHub, fetchpatch
, pkg-config, cython, docutils
, pkg-config, cython_0, docutils
, kivy-garden
, mesa, mtdev, SDL2, SDL2_image, SDL2_ttf, SDL2_mixer
, Accelerate, ApplicationServices, AVFoundation, libcxx
@ -31,7 +31,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
pkg-config
cython
cython_0
docutils
];

9
pkgs/development/python-modules/kombu/default.nix
View File

@ -15,7 +15,7 @@
, pycurl
, pymongo
#, pyro4
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, pyyaml
, redis
@ -89,14 +89,9 @@ buildPythonPackage rec {
nativeCheckInputs = [
case
hypothesis
pytestCheckHook
pytest7CheckHook
] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
];
pythonImportsCheck = [
"kombu"
];

5
pkgs/development/python-modules/kubernetes/default.nix
View File

@ -36,6 +36,11 @@ buildPythonPackage rec {
hash = "sha256-NKrxv5a5gkgpNG7yViTKYBYnU249taWl6fkPJa7/Rzo=";
};
postPatch = ''
substituteInPlace ./kubernetes/base/config/kube_config_test.py \
--replace-fail assertEquals assertEqual
'';
propagatedBuildInputs = [
adal
certifi

5
pkgs/development/python-modules/langchain-core/default.nix
View File

@ -16,7 +16,7 @@
buildPythonPackage rec {
pname = "langchain-core";
version = "0.1.32";
version = "0.1.33";
pyproject = true;
disabled = pythonOlder "3.8";
@ -24,11 +24,12 @@ buildPythonPackage rec {
src = fetchPypi {
pname = "langchain_core";
inherit version;
hash = "sha256-1iaDvsvyD1HxKHV5GgQjIPReqgyHomfTC8A7waB/XsI=";
hash = "sha256-VF7/Peg8xYIxvSsMbWcjI/wgd7lNMmuhoyGRGK8dGmY=";
};
pythonRelaxDeps = [
"langsmith"
"packaging"
];
nativeBuildInputs = [

4
pkgs/development/python-modules/levenshtein/default.nix
View File

@ -2,7 +2,7 @@
, stdenv
, buildPythonPackage
, cmake
, cython_3
, cython
, fetchFromGitHub
, pytestCheckHook
, pythonOlder
@ -28,7 +28,7 @@ buildPythonPackage rec {
nativeBuildInputs = [
cmake
cython_3
cython
scikit-build
];

4
pkgs/development/python-modules/libgpuarray/default.nix
View File

@ -4,7 +4,7 @@
, buildPythonPackage
, fetchFromGitHub
, cmake
, cython
, cython_0
, numpy
, six
, nose
@ -67,13 +67,13 @@ buildPythonPackage rec {
nativeBuildInputs = [
cmake
cython_0
] ++ lib.optionals cudaSupport [
addOpenGLRunpath
];
buildInputs = [
cython
nose
];

9
pkgs/development/python-modules/librouteros/default.nix
View File

@ -2,7 +2,7 @@
, buildPythonPackage
, fetchFromGitHub
, pytest-xdist
, pytestCheckHook
, pytest7CheckHook
, pythonOlder
, setuptools
}:
@ -27,12 +27,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
pytest-xdist
pytestCheckHook
];
pytestFlagsArray = [
# pytest.PytestRemovedIn8Warning: Support for nose tests is deprecated and will be removed in a future release.
"-W" "ignore::pytest.PytestRemovedIn8Warning"
pytest7CheckHook
];
disabledTests = [

5
pkgs/development/python-modules/lightning-utilities/default.nix
View File

@ -11,8 +11,7 @@
# tests
, pytest-timeout
, pytestCheckHook
, pytest_7
, pytest7CheckHook
}:
buildPythonPackage rec {
@ -42,7 +41,7 @@ buildPythonPackage rec {
nativeCheckInputs = [
pytest-timeout
(pytestCheckHook.override { pytest = pytest_7; })
pytest7CheckHook
];
disabledTests = [

4
pkgs/development/python-modules/limits/default.nix
View File

@ -22,7 +22,7 @@
buildPythonPackage rec {
pname = "limits";
version = "3.9.0";
version = "3.10.1";
pyproject = true;
disabled = pythonOlder "3.7";
@ -37,7 +37,7 @@ buildPythonPackage rec {
postFetch = ''
rm "$out/limits/_version.py"
'';
hash = "sha256-X4nf9ifhJjTNKnQuAxRNK9j/MzfAC58kv+19zMWtKg8=";
hash = "sha256-Ax0P9rYTPOrhtOw7FLElSNTGQ3WWCboM3FodTOGZWu8=";
};
postPatch = ''

4
pkgs/development/python-modules/line-profiler/default.nix
View File

@ -1,7 +1,7 @@
{ lib
, buildPythonPackage
, fetchPypi
, cython_3
, cython
, isPyPy
, ipython
, scikit-build
@ -25,7 +25,7 @@ buildPythonPackage rec {
};
nativeBuildInputs = [
cython_3
cython
cmake
scikit-build
];

4
pkgs/development/python-modules/llfuse/default.nix
View File

@ -3,7 +3,7 @@
, buildPythonPackage
, pythonOlder
, fetchFromGitHub
, cython_3
, cython
, fuse
, pkg-config
, pytestCheckHook
@ -27,7 +27,7 @@ buildPythonPackage rec {
hash = "sha256-6/iW5eHmX6ODVPLFkOo3bN9yW8ixqy2MHwQ2r9FA0iI=";
};
nativeBuildInputs = [ cython_3 pkg-config setuptools ];
nativeBuildInputs = [ cython pkg-config setuptools ];
buildInputs = [ fuse ];

6
pkgs/development/python-modules/logical-unification/default.nix
View File

@ -1,6 +1,7 @@
{ lib
, buildPythonPackage
, fetchFromGitHub
, pythonAtLeast
, toolz
, multipledispatch
, py
@ -33,6 +34,11 @@ buildPythonPackage rec {
pytest-benchmark # Needed for the `--benchmark-skip` flag
];
disabledTests = lib.optionals (pythonAtLeast "3.12") [
# Failed: DID NOT RAISE <class 'RecursionError'>
"test_reify_recursion_limit"
];
pytestFlagsArray = [
"--benchmark-skip"
"--html=testing-report.html"

4
pkgs/development/python-modules/lupa/default.nix
View File

@ -1,6 +1,6 @@
{ lib
, buildPythonPackage
, cython_3
, cython
, fetchPypi
, pythonOlder
, setuptools
@ -19,7 +19,7 @@ buildPythonPackage rec {
};
build-system = [
cython_3
cython
setuptools
];

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