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51 Commits

Author SHA1 Message Date
R. Ryantm
6f045a3767 python310Packages.nipype: 1.8.5 -> 1.8.6 2023-05-18 05:09:13 +00:00
Ben Darwin
363bbd4233 python310Packages.nipype: unbreak 2023-04-25 13:51:49 -04:00
Martin Weinelt
0215034f25 python3.pkgs: Migrate fetchers to use hash 
when they already rely on SRI hashes.
 2023-03-03 23:59:29 +01:00
Guillaume Girol
33afbf39f6 treewide: switch to nativeCheckInputs 
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
 2023-01-21 12:00:00 +00:00
Martin Weinelt
f16d438df3 python3Packages.nipype: 1.8.4 -> 1.8.5 2023-01-05 01:10:16 +01:00
Martin Weinelt
9c161fa662 python3Packages.nipype: 1.8.3 -> 1.8.4 2022-09-19 10:37:37 +02:00
Martin Weinelt
2b712ba17d python3Packages.nipype: 1.7.0 -> 1.8.3 2022-07-21 22:34:01 +02:00
Sandro Jäckel
f20d368f2f python310Packages.sparqlwrapper: normalize attr 2022-04-15 01:39:44 +02:00
Jonathan Ringer
68ff633dee
python3Packages.nipype: 1.6.1 -> 1.7.0 2021-11-30 18:52:06 -08:00
Sandro Jäckel
2e9c330216
pythonPackages: deprecate pytest_xdist alias 2021-07-21 13:32:52 +02:00
Sandro Jäckel
4209fed914
pythonPackages: deprecate pytestcov alias 2021-07-21 13:32:17 +02:00
Robert Schütz
1ec5651913 treewide: use pythonPackages.python-dateutil instead of pythonPackages.dateutil 2021-07-03 13:45:57 +02:00
Martin Weinelt
ffea0db4c5 python3Packages.nipype: 1.6.0 -> 1.6.1 2021-06-22 13:42:34 +02:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
R. RyanTM
caa1e8e12f python37Packages.nipype: 1.5.1 -> 1.6.0 2020-11-30 12:27:20 +00:00
Ben Darwin
f31be2ec25 python3Packages.nipype: avoid use of neurdflib by default since it causes a package collision when rdflib is in the closure 2020-10-07 14:02:26 -04:00
Ben Darwin
921b15efe7 python3Packages.nipype: remove Python 2 support (dependency nibabel already unsupported) 2020-10-07 13:49:17 -04:00
Frederik Rietdijk
481c8de7bd python3Packages.nipype: 1.5.0 -> 1.5.1 2020-08-29 10:23:39 -07:00
Frederik Rietdijk
2030083457 python: nipype: 1.4.2 -> 1.5.0 2020-06-11 10:00:02 +02:00
Jonathan Ringer
83f5fd8958 python3Packages.nipype: 1.3.1 -> 1.4.2, enable python3.8 2020-05-04 21:41:05 -07:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Ben Darwin
92763dd8f1 python3Packages.nitime: quote homepage URL 2020-04-09 10:45:09 -04:00
Jonathan Ringer
1abea42347 python38Packages.nipype: mark broken 
Tests on python3.8 hang for several hours, blocking reviews
of other packages.
 2020-02-14 10:55:51 -08:00
Frederik Rietdijk
7759b54df3 python: nipype: 1.2.3 -> 1.3.1 2019-12-30 16:46:44 +01:00
Robin Gloster
318e1ee4ab
treewide: structured-attrs fixes 2019-12-30 04:50:38 +01:00
Frederik Rietdijk
7aedd744d8 Merge master into staging-next 2019-12-16 20:28:10 +01:00
Jonathan Ringer
a5097e915d python3Packages.nipype: fix build, add missing dependencies 2019-12-15 19:18:13 -08:00
Frederik Rietdijk
cc0719f466 python: neurdflib: 5.0.0.post1 -> 5.0.1 2019-12-15 16:23:15 +01:00
Frederik Rietdijk
eeb0767ea2 python: nipype: 1.2.0 -> 1.2.3 2019-10-18 09:53:59 +02:00
Jonathan Ringer
f40a1ef0cc pythonPackages.nipype: 1.1.9 -> 1.2.0 2019-08-18 11:48:40 +02:00
Matthew Bauer
84d00355e8 Merge remote-tracking branch 'NixOS/master' into staging 2019-04-23 22:00:42 -04:00
Daniel Schaefer
bac4d95aa2 treewide: Change URLs to HTTPS 
Lots of URLs were HTTP redirect to HTTPS. Changed those and checked them
if there's actual content. Inspired by
https://github.com/NixOS/nixpkgs/issues/60004
 2019-04-22 10:19:54 +02:00
Frederik Rietdijk
ed7b70b102 python: nipype: 1.1.8 -> 1.1.9 2019-04-18 12:42:41 +02:00
Frederik Rietdijk
e6efedbbdc python: nipype: 1.1.7 -> 1.1.8 2019-02-17 14:40:29 +01:00
worldofpeace
9619e6a7f6 pythonPackages.nipype: 1.1.5 -> 1.1.7 
Fix build by dropping a patch for an issue that is already fixed.
See: https://github.com/nipy/nipype/pull/2701

Also had to disable tests.
See: https://github.com/nipy/nipype/issues/2839
 2019-01-10 20:10:51 -05:00
Frederik Rietdijk
33b6b7c93c python: nipype: 1.1.4 -> 1.1.5 2018-12-03 16:50:38 +01:00
Frederik Rietdijk
a11b94e7e4 python: nipype: 1.1.3 -> 1.1.4 2018-12-03 16:50:32 +01:00
Frederik Rietdijk
1355a82c7f python: nipype: 1.1.2 -> 1.1.3 2018-10-13 09:50:16 +02:00
Ashley Gillman
12c0dd5432 python.pkgs.nipype: Futures is python 2 only. Also fix building. 2018-09-05 22:26:34 +01:00
Frederik Rietdijk
0c0e408db9 python: nipype: 1.1.0 -> 1.1.2 2018-08-25 07:38:22 +02:00
Frederik Rietdijk
ac21188b6e python.pkgs.nipype: add missing dependency 2018-07-26 12:43:19 +02:00
Frederik Rietdijk
6cb00d57ac python: nipype: 1.0.4 -> 1.1.0 2018-07-22 16:52:46 +02:00
Frederik Rietdijk
13cdf3ecd2 python: nipype: 1.0.3 -> 1.0.4 2018-06-22 13:09:22 +02:00
Frederik Rietdijk
82333e0e23 python: nipype: 1.0.2 -> 1.0.3 2018-05-10 10:09:14 +02:00
Frederik Rietdijk
60e656c692 python: nipype: 1.0.1 -> 1.0.2 2018-04-08 11:34:55 +02:00
Robert Schütz
ee1896d63d pythonPackages.nipype: enable tests 2018-03-31 20:43:32 +02:00
Maximilian Bosch
db0fa06fce
pythonPackage.nipype: fix build 
`pythonPackages.prov` has been bumped to `1.5.2`, however `nipype`
pinned `prov` to `1.5.0`. Patching `nipype/info.py` fixes this issue by
bumping to the current `prov` version in nixpkgs.

See https://hydra.nixos.org/build/71817962/log
See ticket #36453
 2018-03-30 18:45:04 +02:00
Frederik Rietdijk
a8e3ffc789 python: nipype: 1.0.0 -> 1.0.1 2018-03-03 11:58:46 +01:00
Frederik Rietdijk
7cb173ebc5 python: nipype: 0.14.0 -> 1.0.0 2018-02-03 17:43:30 +01:00
Ashley Gillman
100bf5ae98 pythonPackages.{nibabel,nipype,prov,pydotplus,xvfbwrapper}: Remove name 2018-01-20 11:32:55 +01:00