colin/nixpkgs
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
612,481 Commits 125 Branches 0 Tags 3.4 GiB
d408a6dc80
Commit Graph

17 Commits

Author SHA1 Message Date
stuebinm
ff1a94e523 treewide: add meta.mainProgram to packages with a single binary 
The nixpkgs-unstable channel's programs.sqlite was used to identify
packages producing exactly one binary, and these automatically added
to their package definitions wherever possible.
 2024-03-19 03:14:51 +01:00
natsukium
04dd7f41e7
bwa: add runHook 2023-05-15 16:13:49 +09:00
natsukium
c85dced23e
bwa: update license 2023-05-15 16:13:49 +09:00
natsukium
01ddcaa879
bwa: 0.7.17 -> unstable-2022-09-23 
Diff: https://github.com/lh3/bwa/compare/v0.7.17...139f68fc4c3747813783a488aef2adc86626b01b
 2023-05-15 16:13:45 +09:00
Ferry Jérémie
65d7e87fdb treewide: replace http by https when https is a permanent redirection 2023-01-22 02:46:49 +01:00
Sergei Trofimovich
428045f39b bwa: pull upstream fix for -fno-common tollchains 
Without the change build fails on -fno-common toolchains like upstream
gcc-10 as:

    $ nix build -L --impure --expr 'with import ./. {}; bwa.overrideAttrs (oa: {   NIX_CFLAGS_COMPILE = (oa.NIX_CFLAGS_COMPILE or "") + "-fno-common"; })'
    ...
    ld: ./libbwa.a(rope.o):/build/bwa-0.7.17/rle.h:33:
      multiple definition of `rle_auxtab'; ./libbwa.a(bwtindex.o):/build/bwa-0.7.17/rle.h:33: first defined here
    ld: ./libbwa.a(rle.o):/build/bwa-0.7.17/rle.h:33:
      multiple definition of `rle_auxtab'; ./libbwa.a(bwtindex.o):/build/bwa-0.7.17/rle.h:33: first defined here
 2022-05-08 08:56:43 +01:00
Luis Pedro Coelho
596c5e7ea2 Static bwa 
AR needs to be passed specifically on the command line
 2022-05-04 02:20:50 +02:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
Justin Bedo
5fc6258043
bwa: expand supported platforms 2020-11-30 09:46:51 +11:00
Robert Scott
f1d2491057 bwa: include static library and some key headers in output 2020-09-20 12:23:18 +01:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
volth
46420bbaa3 treewide: name -> pname (easy cases) (#66585) 
treewide replacement of

stdenv.mkDerivation rec {
  name = "*-${version}";
  version = "*";

to pname
 2019-08-15 13:41:18 +01:00
Arcadio Rubio García
0d05bcae8c bwa: 0.7.16a -> 0.7.17 2018-01-22 01:58:36 +00:00
Robin Gloster
a0967948d9
bwa: 0.7.15 -> 0.7.16a 2017-09-05 14:42:45 +02:00
Tuomas Tynkkynen
f87f37c1ee bwa: Broken on i686 
http://hydra.nixos.org/build/38236956
 2016-08-06 17:06:45 +03:00
Tuomas Tynkkynen
21f17d69f6 treewide: Add lots of meta.platforms 
Build-tested on x86_64 Linux & Mac.
 2016-08-02 21:42:43 +03:00
Luis Pedro Coelho
bd617cb185 init bwa at 0.7.15 
Closes #16064
 2016-06-08 17:25:20 +01:00