Guillaume Girol
33afbf39f6
treewide: switch to nativeCheckInputs
...
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
2023-01-21 12:00:00 +00:00
Fabian Affolter
7d3c53e6d1
snakemake: rename GitPython
2022-12-05 21:53:53 +01:00
R. Ryantm
f28b6e5468
snakemake: 7.14.1 -> 7.14.2
2022-09-27 19:16:23 -04:00
R. Ryantm
fe2504c61b
snakemake: 7.14.0 -> 7.14.1
2022-09-26 23:13:22 -04:00
R. Ryantm
914100fd45
snakemake: 7.12.1 -> 7.14.0
2022-09-08 09:57:07 -04:00
R. Ryantm
7f3ad42166
snakemake: 7.12.0 -> 7.12.1
2022-08-13 16:16:11 -04:00
R. Ryantm
4c3caca96d
snakemake: 7.9.0 -> 7.12.0
2022-07-31 11:06:29 -04:00
R. Ryantm
7a5b52ff26
snakemake: 7.8.5 -> 7.9.0
2022-07-21 15:24:14 +00:00
R. RyanTM
200d8c500a
snakemake: 7.8.3 -> 7.8.5 ( #179874 )
2022-07-04 12:24:26 -04:00
R. Ryantm
671aeb2769
snakemake: 7.8.2 -> 7.8.3
2022-06-21 19:01:53 +00:00
R. Ryantm
acf23020f0
snakemake: 7.8.1 -> 7.8.2
2022-06-09 19:49:56 +00:00
R. Ryantm
e9fb739e59
snakemake: 7.8.0 -> 7.8.1
2022-06-02 01:20:40 +00:00
R. RyanTM
7a54d237e0
snakemake: 7.7.0 -> 7.8.0 ( #174592 )
2022-05-30 10:51:36 -04:00
R. Ryantm
a52b64015a
snakemake: 7.6.2 -> 7.7.0
2022-05-17 16:18:18 +00:00
R. Ryantm
5b55f851ac
snakemake: 7.6.1 -> 7.6.2
2022-05-07 16:16:09 +00:00
R. Ryantm
166b1378fe
snakemake: 7.5.0 -> 7.6.1
2022-05-04 16:06:44 +00:00
Fabian Affolter
8b176291d7
snakemake: 6.15.5 -> 7.5.0
2022-05-01 13:02:10 +02:00
Daniel Wheeler
4befe7a89f
snakemake: 6.10.0 -> 6.15.5 ( #159026 )
...
Fetch from GitHub rather than PyPI so tests are included.
2022-02-17 18:06:23 -05:00
Dmitry Kalinkin
49d19b7945
snakemake: 6.7.0 -> 6.10.0
2021-10-24 17:49:14 -04:00
Dmitry Kalinkin
b8c5c06aab
snakemake: 6.6.1 -> 6.7.0
2021-08-28 02:18:38 -04:00
Sandro Jäckel
b4099137b1
pythonPackages: deprecate ConfigArgParse alias
2021-07-21 13:32:54 +02:00
Dmitry Kalinkin
3a79b1fece
snakemake: 6.5.3 -> 6.6.1
2021-07-19 16:22:36 -04:00
Dmitry Kalinkin
a93f2af20b
snakemake: add missing optional dependenices
...
These are needed to generate reports
2021-07-19 16:19:27 -04:00
Dmitry Kalinkin
45bed6d99f
snakemake: 6.5.0 -> 6.5.3
2021-07-11 10:40:09 -04:00
Dmitry Kalinkin
e3678ae8a6
snakemake: 6.0.5 -> 6.5.0
2021-06-24 11:36:26 -04:00
Sandro Jäckel
d6ff646b3f
pythonPackages.smart_open: rename to smart-open
2021-05-22 15:02:50 -07:00
Dmitry Kalinkin
8887f4655e
snakemake: 5.28.0 -> 6.0.5
2021-03-26 18:32:26 -04:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed
2021-01-25 18:31:47 +01:00
Profpatsch
4a7f99d55d
treewide: with stdenv.lib; in meta -> with lib;
...
Part of: https://github.com/NixOS/nixpkgs/issues/108938
meta = with stdenv.lib;
is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.
This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.
The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Dmitry Kalinkin
68e06c19d6
snakemake: 5.19.3 -> 5.28.0
2020-11-17 17:37:35 -05:00
Dmitry Kalinkin
eb121e0901
snakemake: 5.17.0 -> 5.19.3
2020-07-02 23:36:20 -04:00
R. RyanTM
c1b7c7e87c
snakemake: 5.16.0 -> 5.17.0 ( #88766 )
2020-05-24 13:32:14 -04:00
R. RyanTM
92d970c766
snakemake: 5.15.0 -> 5.16.0 ( #87496 )
2020-05-10 10:09:53 -04:00
Renato Garcia
22133c6bf3
snakemake: 5.13.0 -> 5.15.0 ( #85913 )
2020-04-25 09:19:54 -04:00
Konrad Borowski
f527f9db3a
snakemake: update homepage link to use HTTPS
2020-04-24 19:44:59 -07:00
R. RyanTM
cff5adc2fb
snakemake: 5.10.0 -> 5.13.0 ( #83839 )
2020-03-31 00:39:00 -04:00
Dmitry Kalinkin
68db99ad97
snakemake: 5.9.1 -> 5.10.0
2020-03-14 15:58:24 -07:00
R. RyanTM
a94c66bc88
snakemake: 5.8.1 -> 5.9.1
2020-01-30 09:44:26 +00:00
R. RyanTM
13c757e69c
snakemake: 5.7.4 -> 5.8.1 ( #74637 )
2019-12-09 20:47:24 +01:00
Dmitry Kalinkin
93ee8095b0
snakemake: 5.4.4 -> 5.7.4 ( #72929 )
...
(#72929 )
2019-11-13 00:46:56 +01:00
Dmitry Kalinkin
c321b64b3f
snakemake: 5.2.2 -> 5.4.4
2019-04-10 14:18:26 -04:00
Renato Garcia
318c9296fa
snakemake: add maintainers ( #46117 )
2018-09-05 21:46:17 +02:00
Sebastian Meric de Bellefon
93ce77af40
python.pkgs.snakemake: init at 5.2.2
2018-09-01 09:18:19 -04:00
