nixpkgs/pkgs/applications/science/biology/obitools/obitools3.nix
2021-01-25 18:31:47 +01:00

37 lines
1.0 KiB
Nix

{ lib, fetchurl, python3Packages, cmake, python3 }:
let
pythonPackages = python3Packages;
in
pythonPackages.buildPythonApplication rec {
pname = "obitools3";
version = "3.0.0-beta14";
src = fetchurl {
url = "https://git.metabarcoding.org/obitools/${pname}/repository/v${version}/archive.tar.gz";
sha256 = "17krklxfvxl6baf2m394gm1a88y0lg0bwqx20cf5q39zyw04z442";
};
preBuild = ''
substituteInPlace src/CMakeLists.txt --replace \$'{PYTHONLIB}' "$out/lib/${python3.libPrefix}/site-packages";
export NIX_CFLAGS_COMPILE="-L $out/lib/${python3.libPrefix}/site-packages $NIX_CFLAGS_COMPILE"
'';
disabled = !pythonPackages.isPy3k;
nativeBuildInputs = [ pythonPackages.cython cmake ];
dontConfigure = true;
doCheck = true;
meta = with lib ; {
description = "Management of analyses and data in DNA metabarcoding";
homepage = "https://git.metabarcoding.org/obitools/obitools3";
license = licenses.cecill20;
maintainers = [ maintainers.bzizou ];
platforms = platforms.all;
};
}