natsukium
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9e65d09e3d
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mafft: 7.505 -> 7.508
changed to fetch from new gitlab repository
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2022-09-09 13:26:38 +09:00 |
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Sandro
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ef987a9604
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Merge pull request #189329 from bcdarwin/itk4-removal
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2022-09-05 16:05:51 +02:00 |
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Sandro
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73bf7a0ca0
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Merge pull request #181954 from bzizou/treemix
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2022-09-05 15:57:48 +02:00 |
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Bruno Bzeznik
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7c09cfdc1a
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treemix: init at 1.13
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2022-09-05 06:55:03 +02:00 |
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Jonas Heinrich
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eb3d3b2e90
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Merge pull request #175449 from bzizou/iqtree
iqtree: init at 2.2.0.4
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2022-09-04 23:58:04 +02:00 |
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Ben Darwin
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1280129aab
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EZminc: itk4 -> itk (formally; package is broken)
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2022-09-04 13:36:24 -04:00 |
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Ben Darwin
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961b308fe1
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ants: 2.2.0 -> 2.4.1
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2022-09-04 13:36:24 -04:00 |
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Jonas Heinrich
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3b3a01e3f9
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Merge pull request #188785 from jbedo/last
last: 1406 -> 1409
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2022-09-04 12:40:30 +02:00 |
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Justin Bedo
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d9acf90371
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last: 1406 -> 1409
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2022-09-04 10:36:01 +10:00 |
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Sandro
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9b214e6dad
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Merge pull request #177830 from r-ryantm/auto-update/eggnog-mapper
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2022-09-03 22:43:11 +02:00 |
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Jonas Heinrich
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ed227dc9fb
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Merge pull request #168109 from r-ryantm/auto-update/bcftools
bcftools: 1.15 -> 1.16
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2022-08-27 08:51:34 +02:00 |
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Jonas Heinrich
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21ba29f226
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Merge pull request #181338 from thyol/diamond
diamond: 0.8.36 -> 2.0.15
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2022-08-25 15:25:03 +02:00 |
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Jonas Heinrich
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b8e0c9b652
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Merge pull request #183253 from r-ryantm/auto-update/angsd
angsd: 0.937 -> 0.938
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2022-08-24 10:35:05 +02:00 |
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Jonas Heinrich
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c199cfabff
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Merge pull request #184694 from r-ryantm/auto-update/SPAdes
SPAdes: 3.15.4 -> 3.15.5
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2022-08-23 20:21:42 +02:00 |
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Jonas Heinrich
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5cb64f6046
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Merge pull request #186958 from r-ryantm/auto-update/igv
igv: 2.13.2 -> 2.14.0
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2022-08-21 21:11:49 +02:00 |
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R. Ryantm
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49f4071f30
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eggnog-mapper: 2.1.7 -> 2.1.9
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2022-08-21 12:45:21 +00:00 |
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Jonas Heinrich
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8508d5decf
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Merge pull request #183724 from r-ryantm/auto-update/picard-tools
picard-tools: 2.26.11 -> 2.27.4
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2022-08-21 10:03:42 +02:00 |
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R. Ryantm
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98d1f4c35d
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bcftools: 1.15 -> 1.16
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2022-08-18 18:44:42 +00:00 |
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R. Ryantm
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f4c3ff2d7f
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igv: 2.13.2 -> 2.14.0
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2022-08-16 13:24:02 +00:00 |
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R. Ryantm
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c37112d2d0
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messer-slim: 3.7.1 -> 4.0
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2022-08-14 14:11:37 +00:00 |
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Mario Rodas
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0cab4c8f8a
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Merge pull request #183012 from bcdarwin/update-mni-autoreg
mni_autoreg: unstable-2017-09-22 -> unstable-2022-05-20
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2022-08-13 01:05:26 -05:00 |
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Mario Rodas
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6aeb44c32e
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Merge pull request #185211 from r-ryantm/auto-update/delly
delly: 1.0.3 -> 1.1.3
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2022-08-13 00:41:48 -05:00 |
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kilianar
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0442ab82e0
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igv: 2.8.13 -> 2.13.2
- https://software.broadinstitute.org/software/igv/2.9.x
- https://software.broadinstitute.org/software/igv/2.10.x
- https://software.broadinstitute.org/software/igv/2.11.x
- https://software.broadinstitute.org/software/igv/2.12.x
- https://software.broadinstitute.org/software/igv/2.13.x
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2022-08-07 17:53:06 +02:00 |
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Bobby Rong
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934c6c9a95
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Merge pull request #184334 from r-ryantm/auto-update/mafft
mafft: 7.490 -> 7.505
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2022-08-07 16:18:05 +08:00 |
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R. Ryantm
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8b7c09d0e6
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delly: 1.0.3 -> 1.1.3
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2022-08-05 08:58:15 +00:00 |
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Sandro
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e9984bc607
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Merge pull request #182705 from luispedro/no_test_samtools_on_cross_compile
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2022-08-02 23:20:38 +02:00 |
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Luis Pedro Coelho
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5877d8e072
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samtools: Fix cross-compilation
Tests require bgzip which comes from the htslib package.
This did not cause problems prior to
41485e7337 as tests were not run in
cross-compilation.
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2022-08-02 17:52:50 +02:00 |
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Sandro
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e76aa82431
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Merge pull request #184598 from wegank/treewide-fix-platforms
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2022-08-02 15:57:56 +02:00 |
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R. Ryantm
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921b81745d
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SPAdes: 3.15.4 -> 3.15.5
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2022-08-02 02:26:56 +00:00 |
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Weijia Wang
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278086eddb
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treewide: fix platforms
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2022-08-01 18:33:27 +02:00 |
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R. Ryantm
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b2bbba02ba
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mafft: 7.490 -> 7.505
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2022-07-31 20:32:57 +00:00 |
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R. Ryantm
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e0a9011556
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last: 1268 -> 1406
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2022-07-31 16:58:20 +00:00 |
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R. Ryantm
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9338d8c9b7
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picard-tools: 2.26.11 -> 2.27.4
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2022-07-29 16:12:10 +00:00 |
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R. Ryantm
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8c0e56fc14
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angsd: 0.937 -> 0.938
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2022-07-28 07:50:11 +00:00 |
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Justin Bedő
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9e80da74b0
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Merge pull request #182028 from jbedo/bedops
bedops: 2.4.40 -> 2.4.41
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2022-07-28 09:14:23 +10:00 |
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Ben Darwin
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125da19866
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mni_autoreg: unstable-2017-02-22 -> unstable-2022-05-20
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2022-07-26 16:03:12 -04:00 |
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natsukium
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cf0dc604a6
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dssp: init at 4.0.5
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2022-07-19 12:17:34 +09:00 |
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Justin Bedo
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99fb9abfaa
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bedops: 2.4.40 -> 2.4.41
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2022-07-19 09:09:52 +10:00 |
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Lassulus
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01853c3bcc
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Merge pull request #174547 from r-ryantm/auto-update/delly
delly: 0.9.1 -> 1.0.3
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2022-07-16 10:49:50 +02:00 |
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Pascal Wittmann
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26ddf3454a
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Merge pull request #138255 from natsukium/mafft/init
mafft: init at 7.487
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2022-07-16 00:54:59 +02:00 |
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thyol
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0d6e3afdba
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diamond: update metadata
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2022-07-13 12:33:33 +02:00 |
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thyol
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55853ae096
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maintainers: add thyol
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2022-07-13 12:30:44 +02:00 |
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thyol
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4e79b5e370
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diamond: remove patch
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2022-07-13 11:58:39 +02:00 |
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thyol
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5e765ecc68
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diamond: 0.8.36 -> 2.0.15
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2022-07-13 11:58:02 +02:00 |
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R. Ryantm
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5ea1c721e1
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delly: 0.9.1 -> 1.0.3
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2022-07-07 22:10:48 +00:00 |
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ajs124
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3b5f125515
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maintainers: remove metabar
no github account + only commit is 78c052e91a
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2022-06-29 00:52:13 +02:00 |
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Robert Scott
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466c2e342a
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treewide/applications: add sourceType binaryNativeCode for many packages
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2022-06-23 18:38:19 +01:00 |
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Robert Scott
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444d3a825a
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treewide/python-modules: add sourceProvenance for several packages
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2022-06-20 09:43:10 +02:00 |
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Sandro Jäckel
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0f14467d44
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MACS2: mark broken
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2022-06-06 11:46:22 -07:00 |
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Robert Scott
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3b6bc4b69c
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treewide: set sourceProvenance for packages containing downloaded jars
these are the easily identifiable cases and will not be comprehensive
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2022-06-04 19:47:57 +01:00 |
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