Vincent Laporte
cccc3b53f4
why3: 1.5.0 → 1.5.1
2022-09-16 13:29:18 +02:00
Bouke van der Bijl
079dc8c3a9
why3: use why3.version in withProvers
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I was getting an error that 'name' was not defined, which was being
caused by pname being passed in without a version.
Using the version of the why3 package resolves this.
2022-09-15 13:51:50 +02:00
K900
42dc5a7269
Merge pull request #188924 from McSinyx/klee-llvm
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klee: use the same LLVM version for clang
2022-09-15 10:36:25 +03:00
R. Ryantm
101fa50263
cbmc: 5.65.0 -> 5.65.1
2022-09-14 22:04:14 +08:00
7c6f434c
1cea3c2362
Merge pull request #190919 from r-ryantm/auto-update/clingo
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clingo: 5.5.2 -> 5.6.0
2022-09-13 18:04:50 +00:00
Gabriel Ebner
38aa976494
elan: 1.4.1 -> 1.4.2
2022-09-13 11:02:26 +02:00
R. Ryantm
4fbc5fa77f
nanovna-saver: 0.5.1 -> 0.5.2
2022-09-12 19:15:18 +00:00
Timo Kaufmann
f77ac81009
Merge pull request #190892 from r-ryantm/auto-update/jmol
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jmol: 14.32.73 -> 14.32.74
2022-09-12 19:26:49 +02:00
R. Ryantm
09bed085c3
clingo: 5.5.2 -> 5.6.0
2022-09-12 11:37:36 +00:00
R. Ryantm
55e1e9a104
jmol: 14.32.73 -> 14.32.74
2022-09-12 07:15:47 +00:00
Sandro
c300be33fd
Merge pull request #186868 from lopsided98/mavproxy-update
2022-09-11 19:21:27 +02:00
Sandro Jäckel
224da23db2
sasview: remove unused input
2022-09-11 16:25:56 +02:00
Sandro
785031e430
Merge pull request #185819 from apraga/gatk-4.2.6.1
2022-09-10 21:31:42 +02:00
Christian Kögler
a25f0b9bbd
Merge pull request #190317 from r-ryantm/auto-update/nanovna-saver
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nanovna-saver: 0.4.0 -> 0.5.1
2022-09-10 15:58:21 +02:00
R. Ryantm
6e55797c64
nanovna-saver: 0.4.0 -> 0.5.1
2022-09-10 01:28:51 +00:00
Sandro
65c1313165
Merge pull request #189758 from tjni/r-stackprotector
2022-09-10 00:41:39 +02:00
Mario Rodas
448df40425
Merge pull request #190430 from natsukium/mafft/update
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mafft: 7.505 -> 7.508
2022-09-09 09:02:08 -05:00
Jonas Heinrich
89da4a3ace
Merge pull request #190382 from 4825764518/qalculate-qt-4.3.0
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qalculate-qt: 4.2.0 -> 4.3.0
2022-09-09 10:45:41 +02:00
Vincent Laporte
a22abdf7c2
acgtk: 1.5.2 → 1.5.4
2022-09-09 08:53:49 +02:00
natsukium
9e65d09e3d
mafft: 7.505 -> 7.508
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changed to fetch from new gitlab repository
2022-09-09 13:26:38 +09:00
Dmitry Kalinkin
ea1dcc4f8b
Merge pull request #189926 from veprbl/pr/root_rip_via_setup_hook
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root: populate ROOT_INCLUDE_PATH via the setupHook
2022-09-08 19:45:45 -04:00
4825764518
4dbacd4930
qalculate-qt: 4.2.0 -> 4.3.0
2022-09-08 16:16:51 -04:00
4825764518
eeefb876af
qalculate-qt: init at 4.2.0
2022-09-08 14:20:20 -04:00
R. Ryantm
914100fd45
snakemake: 7.12.1 -> 7.14.0
2022-09-08 09:57:07 -04:00
Jonas Heinrich
eab3e4bffa
Merge pull request #190087 from victormignot/systemc
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systemc: Init at 2.3.3
2022-09-07 21:16:40 +02:00
7c6f434c
41df56c421
Merge pull request #189784 from collares/singular-431p2
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singular: 4.3.1 -> 4.3.1p2
2022-09-07 18:58:16 +00:00
Théo Zimmermann
4754c69e97
Merge pull request #189997 from r-ryantm/auto-update/coq_8_16
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coq_8_16: 8.16+rc1 -> 8.16.0
2022-09-07 14:48:05 +02:00
Victor Mignot
777ba23c17
systemc: Init at 2.3.3
2022-09-07 08:04:56 -04:00
Christian Kögler
1034788cf2
Merge pull request #189339 from r-ryantm/auto-update/jmol
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jmol: 14.32.68 -> 14.32.73
2022-09-06 22:09:07 +02:00
Timo Kaufmann
5e03752766
Merge pull request #184457 from r-ryantm/auto-update/polymake
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polymake: 4.6 -> 4.7
2022-09-06 16:22:36 +02:00
Timo Kaufmann
b292bfd0ab
Merge pull request #189776 from collares/sage-docindex
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sageWithDoc: fix documentation index
2022-09-06 16:15:54 +02:00
R. Ryantm
a037a50b46
coq_8_16: 8.16+rc1 -> 8.16.0
2022-09-06 12:15:29 +00:00
Dmitry Kalinkin
0fe6d6f6b9
root: populate ROOT_INCLUDE_PATH via the setupHook
2022-09-05 18:47:48 -04:00
markuskowa
fec757aa4e
Merge pull request #189871 from r-ryantm/auto-update/gromacs
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gromacs: 2022.2 -> 2022.3
2022-09-05 22:27:10 +02:00
Mauricio Collares
13d2edaa42
sageWithDoc: fix documentation index
2022-09-05 12:42:36 -03:00
R. Ryantm
53a4c0bec3
gromacs: 2022.2 -> 2022.3
2022-09-05 15:04:40 +00:00
Sandro
ef987a9604
Merge pull request #189329 from bcdarwin/itk4-removal
2022-09-05 16:05:51 +02:00
Sandro
73bf7a0ca0
Merge pull request #181954 from bzizou/treemix
2022-09-05 15:57:48 +02:00
Bruno Bzeznik
7c09cfdc1a
treemix: init at 1.13
2022-09-05 06:55:03 +02:00
Mauricio Collares
91311e30b3
singular: disable docbuilding on darwin
2022-09-04 22:12:22 -03:00
Mauricio Collares
ea79b7ad0c
singular: 4.3.1 -> 4.3.1p2
2022-09-04 21:42:47 -03:00
Jonas Heinrich
eb3d3b2e90
Merge pull request #175449 from bzizou/iqtree
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iqtree: init at 2.2.0.4
2022-09-04 23:58:04 +02:00
Ben Wolsieffer
073d3c1b77
mavproxy: add lxml dependency
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Also, alphabetize the dependencies.
Add dependencies that are not part of install_requires (apparently due to
some issue with pip and distro packaging). The closure size is increased
somewhat by OpenCV, but this allows all the tools to work correctly.
2022-09-04 17:30:03 -04:00
Jonas Heinrich
bb738c5202
Merge pull request #179257 from mrbitt/master
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Update perseus
2022-09-04 23:09:19 +02:00
Theodore Ni
093edcbfcb
R: reenable stackprotector on aarch64-darwin
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The original error that required disabling the stack protector on
aarch64-darwin has been fixed in GCC.
2022-09-04 11:33:51 -07:00
Ben Darwin
1280129aab
EZminc: itk4 -> itk (formally; package is broken)
2022-09-04 13:36:24 -04:00
Ben Darwin
961b308fe1
ants: 2.2.0 -> 2.4.1
2022-09-04 13:36:24 -04:00
Sandro
6b52fe0b72
Merge pull request #188855 from risicle/ris-hal-fmt-8.0.1-override
2022-09-04 16:30:36 +02:00
Alexis Praga
95da303902
gatk : init at 4.2.6.1
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GATK is the industry standard for genetics analysis, more precisely for
identifying SNPs and indels in germline DNA and RNAseq data .
This package does not ship the Spark version.
Apply suggestions from code review
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-09-04 15:34:30 +02:00
Iztok Fister Jr
af482381f6
uarmsolver: init at 0.2.4 ( #188274 )
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Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-09-04 14:44:43 +02:00
